RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PI16Q6UXB8 463 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 SUPT20HQ8NEM7 779 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 OR8K1Q8NGG5 319 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 GPATCH8Q9UKJ3 1502 aaKnown RBP8.28□□□□□ -1.08
RIF1-201ENST00000243326 DEXIO95424 95 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 IL13P35225 146 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 ZNF654Q8IZM8 581 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 LRRC27Q9C0I9 530 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 NFU1Q9UMS0 254 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 CALML3P27482 149 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 TTLL7Q6ZT98 887 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 RNF34Q969K3 372 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 ODF2LQ9ULJ1 636 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 BCS1LQ9Y276 419 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 RMDN2Q96LZ7 410 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 BMP15O95972 392 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 MLKLQ8NB16 471 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 SETDB2Q96T68 719 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
RIF1-201ENST00000243326 RANBP1P43487 201 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 MDH1BQ5I0G3 518 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 NUF2Q9BZD4 464 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 HIP1RO75146 1068 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 UBL4BQ8N7F7 174 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 ESYT3A0FGR9 886 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 MTF1Q14872 753 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 HS2ST1Q7LGA3 356 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
RIF1-201ENST00000243326 CYP4A11Q02928 519 aa8.27□□□□□ -1.08
RIF1-201ENST00000243326 CFAP36Q96G28 342 aa8.27□□□□□ -1.08
RIF1-201ENST00000243326 ELAC2Q9BQ52 826 aaKnown RBP8.27□□□□□ -1.08
RIF1-201ENST00000243326 CASP2P42575 452 aa8.27□□□□□ -1.08
RIF1-201ENST00000243326 SCYL2Q6P3W7 929 aa8.27□□□□□ -1.08
RIF1-201ENST00000243326 A2MP01023 1474 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 SPECC1L-ADORA2AF8WAN1 911 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 CASQ2O14958 399 aaPredicted RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 BIRC2Q13490 618 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 THAP12O43422 761 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 EXOC3O60645 756 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 NNTQ13423 1086 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 SIRT2Q8IXJ6 389 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 TDRD7Q8NHU6 1098 aaKnown RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 HAUS1Q96CS2 278 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 SMYD2Q9NRG4 433 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 CUL7Q14999 1698 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 CD19P15391 556 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 PLTPP55058 493 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 TTBK2Q6IQ55 1244 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 NSUN7Q8NE18 718 aaKnown RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 PCIF1Q9H4Z3 704 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 ZSWIM6Q9HCJ5 1215 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 EPN1Q9Y6I3 576 aaPredicted RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 ADCY9O60503 1353 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 TMTC2Q8N394 836 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 LRRC45Q96CN5 670 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 NUCKS1Q9H1E3 243 aaKnown RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 GAS8O95995 478 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 DYNLT1P63172 113 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 PPFIA1Q13136 1202 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 EIF3CLB5ME19 914 aaKnown RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 CLIC2O15247 247 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 APPBP2Q92624 585 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 EIF3CQ99613 913 aaKnown RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 I3L4J1 428 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 RFC4P35249 363 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 PRPHP41219 470 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 TAOK1Q7L7X3 1001 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 ZNF653Q96CK0 615 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 INSRP06213 1382 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 CCDC195A0A1B0GUA6 201 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 MYO1CO00159 1063 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 HOXC9P31274 260 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 DYNLL1P63167 89 aaKnown RBP8.27□□□□□ -1.09
RIF1-201ENST00000243326 NR5A1Q13285 461 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
RIF1-201ENST00000243326 KDM5BQ9UGL1 1544 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 EYA2O00167 538 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 PFKFB2O60825 505 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 CASP8Q14790 479 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 CDC23Q9UJX2 597 aa8.27□□□□□ -1.09
RIF1-201ENST00000243326 RP1P56715 2156 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 ZWINTO95229 277 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 WHAMMQ8TF30 809 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 PPP1R16BQ96T49 567 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 INTS9Q9NV88 658 aaKnown RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 UHRF1BP1Q6BDS2 1440 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 GGCXP38435 758 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 SPDL1Q96EA4 605 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 METTL22Q9BUU2 404 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 AZI2Q9H6S1 392 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 MEIS1O00470 390 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 TFAP4Q01664 338 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 ZNF185O15231 689 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 HIBCHQ6NVY1 386 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 SH2D3CQ8N5H7 860 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 RAPGEF6Q8TEU7 1601 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms