RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 DLATP10515 647 aaKnown RBP20.44■□□□□ 0.86
CLIP2-201ENST00000223398 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 TRIM31Q9BZY9 425 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 USP14P54578 494 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 CLIC6Q96NY7 704 aa20.44■□□□□ 0.86
CLIP2-201ENST00000223398 KIAA1524Q8TCG1 905 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 USP28Q96RU2 1077 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 PANK4Q9NVE7 773 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 RBSNQ9H1K0 784 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 P4HA1P13674 534 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 PDIA3P30101 505 aaKnown RBP20.43■□□□□ 0.86
CLIP2-201ENST00000223398 FAM178BQ8IXR5 827 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 PUS7LQ9H0K6 701 aaKnown RBP20.43■□□□□ 0.86
CLIP2-201ENST00000223398 SEPT9Q9UHD8 586 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-201ENST00000223398 VAV2P52735 878 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 MYOCDQ8IZQ8 938 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
CLIP2-201ENST00000223398 NRBP2Q9NSY0 501 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 ADD2P35612 726 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 MECOMQ03112 1051 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 RRAGAQ7L523 313 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 CCDC127Q96BQ5 260 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 ZSWIM6Q9HCJ5 1215 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 GPR108Q9NPR9 543 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
CLIP2-201ENST00000223398 NR1I2O75469 434 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 TMOD1P28289 359 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 ZBTB16Q05516 673 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 KDM6BO15054 1643 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 ZHX1Q9UKY1 873 aaPredicted RBP20.42■□□□□ 0.86
CLIP2-201ENST00000223398 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLIP2-201ENST00000223398 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 ADCK5Q3MIX3 580 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 ZNF365Q70YC5 407 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 FBF1Q8TES7 1133 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 LSM14BQ9BX40 385 aaKnown RBP20.42■□□□□ 0.86
CLIP2-201ENST00000223398 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 EN1Q05925 392 aaPredicted RBP20.42■□□□□ 0.86
CLIP2-201ENST00000223398 UBL4BQ8N7F7 174 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 STMN4Q9H169 189 aaPredicted RBP20.42■□□□□ 0.86
CLIP2-201ENST00000223398 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
CLIP2-201ENST00000223398 SNAP25P60880 206 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 FAM160B1Q5W0V3 765 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 PIGSQ96S52 555 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 KCNQ2O43526 872 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 OPA1O60313 960 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 MAGEA1P43355 309 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 PTPN12Q05209 780 aaKnown RBP20.41■□□□□ 0.86
CLIP2-201ENST00000223398 PTGDRQ13258 359 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 C6orf163Q5TEZ5 329 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 SFMBT2Q5VUG0 894 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 LRCH2Q5VUJ6 765 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 TTLL11Q8NHH1 800 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 NUP58Q9BVL2 599 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 AP5M1Q9H0R1 490 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 CSRNP2Q9H175 543 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 SLC39A2Q9NP94 309 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 GPATCH4Q5T3I0 446 aaKnown RBP20.41■□□□□ 0.86
CLIP2-201ENST00000223398 MCTP2Q6DN12 878 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 KCNG1Q9UIX4 513 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 BMP3P12645 472 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
CLIP2-201ENST00000223398 TYW1BQ6NUM6 668 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 KRT26Q7Z3Y9 468 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 SYNE4Q8N205 404 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 IWS1Q96ST2 819 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 AKT3Q9Y243 479 aa20.41■□□□□ 0.86
CLIP2-201ENST00000223398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 SNAP23O00161 211 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 SCRN1Q12765 414 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 DMP1Q13316 513 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 MTX1Q13505 466 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 RASGRF1Q13972 1273 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 CCDC26Q8TAB7 109 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 COA7Q96BR5 231 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 PPANQ9NQ55 473 aaKnown RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 ODF2LQ9ULJ1 636 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 TNNC2P02585 160 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 IREB2P48200 963 aaKnown RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 USP17L2Q6R6M4 530 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 ZNF577Q9BSK1 485 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 PSDA5PKW4 1024 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 ASPRV1Q53RT3 343 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 KIAA1024Q9UPX6 916 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 PI4KBQ9UBF8 816 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 GEN1Q17RS7 908 aa20.4■□□□□ 0.86
CLIP2-201ENST00000223398 NSRP1Q9H0G5 558 aaKnown RBP20.4■□□□□ 0.86
CLIP2-201ENST00000223398 SOS2Q07890 1332 aaPredicted RBP20.39■□□□□ 0.86
CLIP2-201ENST00000223398 STK10O94804 968 aaKnown RBP20.39■□□□□ 0.86
CLIP2-201ENST00000223398 CCDC125Q86Z20 511 aa20.39■□□□□ 0.86
CLIP2-201ENST00000223398 PIH1D3Q9NQM4 214 aaKnown RBP20.39■□□□□ 0.86
CLIP2-201ENST00000223398 CYP21A2P08686 494 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 SECISBP2LQ93073 1101 aaKnown RBP20.39■□□□□ 0.85
CLIP2-201ENST00000223398 EEF2KMTQ96G04 330 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 PPP1R16BQ96T49 567 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 KIF1BO60333 1816 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms