RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
SRP54-201ENST00000216774 SMARCC1Q92922 1105 aaPredicted RBP14.99□□□□□ -0.01
SRP54-201ENST00000216774 ACSBG1Q96GR2 724 aa14.99□□□□□ -0.01
SRP54-201ENST00000216774 ZSWIM4Q9H7M6 989 aa14.99□□□□□ -0.01
SRP54-201ENST00000216774 KAT14Q9H8E8 782 aa14.99□□□□□ -0.01
SRP54-201ENST00000216774 MYH13Q9UKX3 1938 aa14.99□□□□□ -0.01
SRP54-201ENST00000216774 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 A0A0G2JS52 829 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 RNF225M0QZC1 329 aaPredicted RBP14.98□□□□□ -0.01
SRP54-201ENST00000216774 COBLO75128 1261 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 BEND6Q5SZJ8 279 aaPredicted RBP14.98□□□□□ -0.01
SRP54-201ENST00000216774 GALNT17Q6IS24 598 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 ANKS1AQ92625 1134 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 THAP9Q9H5L6 903 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
SRP54-201ENST00000216774 COL5A3P25940 1745 aaPredicted RBP14.98□□□□□ -0.01
SRP54-201ENST00000216774 CTAGE15A4D2H0 777 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 LGALS16A8MUM7 142 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 M0R2N6 131 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 PARP1P09874 1014 aaKnown RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 CTAGE8P0CG41 777 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 HIBADHP31937 336 aaKnown RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 GNAQP50148 359 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 EVX2Q03828 476 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 DTHD1Q6ZMT9 781 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 HDXQ7Z353 690 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 CTAGE6Q86UF2 777 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 IRF2BP1Q8IU81 584 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 CTAGE4Q8IX94 777 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 OR8K1Q8NGG5 319 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 CELF1Q92879 486 aaKnown RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 DNAJC7Q99615 494 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 GDAQ9Y2T3 454 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 LAD1O00515 517 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 ADAMTS3O15072 1205 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 NDUFA10O95299 355 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 CDC25AP30304 524 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 STIM1Q13586 685 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 CCDC178Q5BJE1 867 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 MB21D1Q8N884 522 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 NOC3LQ8WTT2 800 aaKnown RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 ANKRD2Q9GZV1 360 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 GBP3Q9H0R5 595 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 EPN1Q9Y6I3 576 aaPredicted RBP14.97□□□□□ -0.01
SRP54-201ENST00000216774 FAM205AQ6ZU69 1335 aa14.97□□□□□ -0.01
SRP54-201ENST00000216774 CCDC194A0A1B0GVG4 234 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 CYP2D6P10635 497 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 AMPD2Q01433 879 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 NAALADL2Q58DX5 795 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 CCDC148Q8NFR7 591 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 PNKPQ96T60 521 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 SLF1Q9BQI6 1058 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 CCSER1Q9C0I3 900 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 PSD3Q9NYI0 1048 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 MYH8P13535 1937 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 RHOBTB3O94955 611 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 TAF1P21675 1872 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 KLRK1P26718 216 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 PRPHP41219 470 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 RPS8P62241 208 aaKnown RBP14.96□□□□□ -0.01
SRP54-201ENST00000216774 GRM4Q14833 912 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 PNMA1Q8ND90 353 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 EXOC4Q96A65 974 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 CUEDC2Q9H467 287 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 HAUS4Q9H6D7 363 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 MAGEF1Q9HAY2 307 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 ZCCHC17Q9NP64 241 aaKnown RBP14.96□□□□□ -0.01
SRP54-201ENST00000216774 KBTBD4Q9NVX7 518 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 MYO6Q9UM54 1294 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 CAPN11Q9UMQ6 739 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 L1RE1Q9UN81 338 aa14.96□□□□□ -0.01
SRP54-201ENST00000216774 LUC7L2Q9Y383 392 aaKnown RBP14.96□□□□□ -0.01
SRP54-201ENST00000216774 TTC26A0AVF1 554 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 PSMD14O00487 310 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 PSMA7O14818 248 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 EIF3JO75822 258 aaKnown RBP14.95□□□□□ -0.02
SRP54-201ENST00000216774 ABL1P00519 1130 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 PRDX5P30044 214 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 SPTY2D1Q68D10 685 aaPredicted RBP14.95□□□□□ -0.02
SRP54-201ENST00000216774 ZNF662Q6ZS27 426 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 ZNF507Q8TCN5 953 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 MCM9Q9NXL9 1143 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 MAPK8IP1Q9UQF2 711 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
SRP54-201ENST00000216774 UBA7P41226 1012 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 TFAP4Q01664 338 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 TSR1Q2NL82 804 aaKnown RBP14.95□□□□□ -0.02
SRP54-201ENST00000216774 C12orf60Q5U649 245 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 GIMAP8Q8ND71 665 aaPredicted RBP14.95□□□□□ -0.02
SRP54-201ENST00000216774 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.02
SRP54-201ENST00000216774 IL17RBQ9NRM6 502 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 REXO2Q9Y3B8 237 aaKnown RBP14.95□□□□□ -0.02
SRP54-201ENST00000216774 ROBO3Q96MS0 1386 aa14.95□□□□□ -0.02
SRP54-201ENST00000216774 KLRC4O43908 158 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 ST5P78524 1137 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 RASSF8Q8NHQ8 419 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms