RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SARNPP82979 210 aaKnown RBP14.93□□□□□ -0.02
SF3A1-201ENST00000215793 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 RIOK1Q9BRS2 568 aaKnown RBP14.93□□□□□ -0.02
SF3A1-201ENST00000215793 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
SF3A1-201ENST00000215793 A0A1W2PQ27 194 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 A0A1W2PQ64 194 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 A0A1W2PQD8 194 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 CYP2J2P51589 502 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 GRK7Q8WTQ7 553 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 MIS12Q9H081 205 aa14.93□□□□□ -0.02
SF3A1-201ENST00000215793 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
SF3A1-201ENST00000215793 RGS12O14924 1447 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 BTBD18B2RXH4 712 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 DTNBO60941 627 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 PRR16Q569H4 304 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 ZBTB8OSQ8IWT0 167 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 PCDHA7Q9UN72 937 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 CTNNA1P35221 906 aaKnown RBP14.92□□□□□ -0.02
SF3A1-201ENST00000215793 GPIHBP1Q8IV16 184 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 FAM178BQ8IXR5 827 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 NUF2Q9BZD4 464 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 SLAIN2Q9P270 581 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 STAP2Q9UGK3 403 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 BCAP29Q9UHQ4 241 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 MED23Q9ULK4 1368 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 UIMC1Q96RL1 719 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 FAM135BQ49AJ0 1406 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 PLXNC1O60486 1568 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 KCNK3O14649 394 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 FOSP01100 380 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-201ENST00000215793 H2AFZP0C0S5 128 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 POLR2MP0CAP2 368 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 STX2P32856 288 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 LRMPQ12912 555 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 HADHQ16836 314 aaKnown RBP14.92□□□□□ -0.02
SF3A1-201ENST00000215793 H2AFVQ71UI9 128 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 KRT26Q7Z3Y9 468 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 C1orf112Q9NSG2 853 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 PPP2R2CQ9Y2T4 447 aa14.92□□□□□ -0.02
SF3A1-201ENST00000215793 KRIT1O00522 736 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 ABCB4P21439 1286 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 GYG1P46976 350 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 FAM26FQ5R3K3 315 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 RSAD2Q8WXG1 361 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 ZNF408Q9H9D4 720 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 EFCAB8A8MWE9 144 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 BUB1BO60566 1050 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-201ENST00000215793 TROVE2P10155 538 aaKnown RBP eCLIP14.91□□□□□ -0.02
SF3A1-201ENST00000215793 MAP7Q14244 749 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 AOC3Q16853 763 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 PHLDB2Q86SQ0 1253 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 FBXO11Q86XK2 927 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 ST7Q9NRC1 585 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 RAB20Q9NX57 234 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 IFNB1P01574 187 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 FLAD1Q8NFF5 587 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 MAP4K1Q92918 833 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 EPSTI1Q96J88 318 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 PANK4Q9NVE7 773 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 AFG3L2Q9Y4W6 797 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 CASQ2O14958 399 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-201ENST00000215793 TRIM37O94972 964 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 PDIA3P30101 505 aaKnown RBP14.91□□□□□ -0.02
SF3A1-201ENST00000215793 PHBP35232 272 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 LIG4P49917 911 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 CTAGE3PQ8IX95 158 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 PPP1R12CQ9BZL4 782 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 FANCLQ9NW38 375 aa14.91□□□□□ -0.02
SF3A1-201ENST00000215793 ADCY9O60503 1353 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 TRAPPC10P48553 1259 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 CUEDC2Q9H467 287 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 PSDA5PKW4 1024 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 ZNF500O60304 480 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 PDE8BO95263 885 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 BCAMP50895 628 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 YARSP54577 528 aaKnown RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 FAM102BQ5T8I3 360 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 CMTR1Q8N1G2 835 aaKnown RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 SMCR8Q8TEV9 937 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 HAUS1Q96CS2 278 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 GSDMAQ96QA5 445 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 ATP7AQ04656 1500 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 KCNQ3O43525 872 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 RPN1P04843 607 aaKnown RBP14.9□□□□□ -0.02
SF3A1-201ENST00000215793 GABPAQ06546 454 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 DCAF15Q66K64 600 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 PALM2Q8IXS6 379 aa14.9□□□□□ -0.02
SF3A1-201ENST00000215793 MLXIPQ9HAP2 919 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms