RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 LCMT1Q9UIC8 334 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 ATP1A1P05023 1023 aaKnown RBP19.18■□□□□ 0.66
PTPN18-201ENST00000175756 ERVK-24P63145 666 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 MDM2Q00987 491 aaPredicted RBP19.18■□□□□ 0.66
PTPN18-201ENST00000175756 TRIM14Q14142 442 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 CCDC40Q4G0X9 1142 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 GPATCH11Q8N954 259 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 SECISBP2LQ93073 1101 aaKnown RBP19.18■□□□□ 0.66
PTPN18-201ENST00000175756 TUBGCP2Q9BSJ2 902 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 HAUS4Q9H6D7 363 aa19.18■□□□□ 0.66
PTPN18-201ENST00000175756 STK36Q9NRP7 1315 aa19.17■□□□□ 0.66
PTPN18-201ENST00000175756 GTF2A1P52655 376 aaPredicted RBP19.17■□□□□ 0.66
PTPN18-201ENST00000175756 CALML4Q96GE6 196 aa19.17■□□□□ 0.66
PTPN18-201ENST00000175756 ALS2CR12Q96Q35 445 aa19.17■□□□□ 0.66
PTPN18-201ENST00000175756 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
PTPN18-201ENST00000175756 SLC39A2Q9NP94 309 aa19.17■□□□□ 0.66
PTPN18-201ENST00000175756 SEC63Q9UGP8 760 aaKnown RBP19.17■□□□□ 0.66
PTPN18-201ENST00000175756 FEZ2Q9UHY8 353 aaPredicted RBP19.17■□□□□ 0.66
PTPN18-201ENST00000175756 MAATS1Q7Z4T9 603 aa19.17■□□□□ 0.66
PTPN18-201ENST00000175756 BLIDQ8IZY5 108 aa19.17■□□□□ 0.66
PTPN18-201ENST00000175756 H7C1D1 291 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 BUB1O43683 1085 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 BEND6Q5SZJ8 279 aaPredicted RBP19.16■□□□□ 0.66
PTPN18-201ENST00000175756 KCTD16Q68DU8 428 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 FBXL16Q8N461 479 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 SMCR8Q8TEV9 937 aaPredicted RBP19.16■□□□□ 0.66
PTPN18-201ENST00000175756 ANKZF1Q9H8Y5 726 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 ATP1A2P50993 1020 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 SETQ01105 290 aaPredicted RBP19.16■□□□□ 0.66
PTPN18-201ENST00000175756 TUBB2AQ13885 445 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 KRT26Q7Z3Y9 468 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 FAM71BQ8TC56 605 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 MMS19Q96T76 1030 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 TUBB2BQ9BVA1 445 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 EBAG9O00559 213 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 ARID4AP29374 1257 aaPredicted RBP19.16■□□□□ 0.66
PTPN18-201ENST00000175756 NOP2P46087 812 aaKnown RBP19.16■□□□□ 0.66
PTPN18-201ENST00000175756 CCT5P48643 541 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 RRAGAQ7L523 313 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 RASGRP2Q7LDG7 609 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 IFIH1Q9BYX4 1025 aaKnown RBP19.16■□□□□ 0.66
PTPN18-201ENST00000175756 TBC1D7Q9P0N9 293 aa19.16■□□□□ 0.66
PTPN18-201ENST00000175756 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
PTPN18-201ENST00000175756 PPP1R3GB7ZBB8 358 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 TECP42680 631 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 SF3A3Q12874 501 aaKnown RBP eCLIP19.15■□□□□ 0.663e-11■■■■■ 32.6
PTPN18-201ENST00000175756 HPS3Q969F9 1004 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 WNT7AO00755 349 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 LIG3P49916 1009 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 DPYDQ12882 1025 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 ZNF658Q5TYW1 1059 aaPredicted RBP19.15■□□□□ 0.66
PTPN18-201ENST00000175756 FOXR1Q6PIV2 292 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 RWDD2AQ9UIY3 292 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 HSF2BPO75031 334 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 ATP2C2O75185 946 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 LRWD1Q9UFC0 647 aa19.15■□□□□ 0.66
PTPN18-201ENST00000175756 PRPF3O43395 683 aaKnown RBP19.14■□□□□ 0.66
PTPN18-201ENST00000175756 MNAT1P51948 309 aa19.14■□□□□ 0.66
PTPN18-201ENST00000175756 TUBB4BP68371 445 aa19.14■□□□□ 0.66
PTPN18-201ENST00000175756 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.66
PTPN18-201ENST00000175756 ALX1Q15699 326 aa19.14■□□□□ 0.66
PTPN18-201ENST00000175756 SMIM5Q71RC9 77 aa19.14■□□□□ 0.66
PTPN18-201ENST00000175756 AGPAT5Q9NUQ2 364 aa19.14■□□□□ 0.66
PTPN18-201ENST00000175756 TICAM2Q86XR7 235 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 FAM114A1Q8IWE2 563 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 UBA5Q9GZZ9 404 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 MAGEA1P43355 309 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 SRBD1Q8N5C6 995 aaKnown RBP19.14■□□□□ 0.65
PTPN18-201ENST00000175756 MB21D1Q8N884 522 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 MED15Q96RN5 788 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 SAMM50Q9Y512 469 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 DUSP10Q9Y6W6 482 aa19.14■□□□□ 0.65
PTPN18-201ENST00000175756 CLSTN1O94985 981 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 TUBBP07437 444 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 KLK7P49862 253 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 EIF6P56537 245 aaKnown RBP19.13■□□□□ 0.65
PTPN18-201ENST00000175756 CABP7Q86V35 215 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 PNMA1Q8ND90 353 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 GOLGA6L10A6NI86 522 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 TMCO5BA8MYB1 307 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 RNF225M0QZC1 329 aaPredicted RBP19.13■□□□□ 0.65
PTPN18-201ENST00000175756 SARSP49591 514 aaKnown RBP19.13■□□□□ 0.65
PTPN18-201ENST00000175756 AMPD3Q01432 767 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 DYNLL2Q96FJ2 89 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 SMARCAL1Q9NZC9 954 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 DNM2P50570 870 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 GUCY2FP51841 1108 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 BCAS4Q8TDM0 211 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 TAF4BQ92750 862 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 CNOT6LQ96LI5 555 aaKnown RBP19.13■□□□□ 0.65
PTPN18-201ENST00000175756 CARD10Q9BWT7 1032 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
PTPN18-201ENST00000175756 LRRIQ3A6PVS8 624 aaPredicted RBP19.12■□□□□ 0.65
PTPN18-201ENST00000175756 VEGFAP15692 232 aaPredicted RBP19.12■□□□□ 0.65
PTPN18-201ENST00000175756 GGCXP38435 758 aa19.12■□□□□ 0.65
PTPN18-201ENST00000175756 NHEJ1Q9H9Q4 299 aaPredicted RBP19.12■□□□□ 0.65
PTPN18-201ENST00000175756 USP17L8P0C7I0 530 aa19.12■□□□□ 0.65
PTPN18-201ENST00000175756 PPP2R5BQ15173 497 aa19.12■□□□□ 0.65
PTPN18-201ENST00000175756 IPO4Q8TEX9 1081 aaKnown RBP19.12■□□□□ 0.65
PTPN18-201ENST00000175756 L1RE1Q9UN81 338 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms