RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 Q9H521 79 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ATP6V0A4Q9HBG4 840 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PPP2R5AQ15172 486 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ALKBH8Q96BT7 664 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 CCDC8Q9H0W5 538 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 C6orf203Q9P0P8 240 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 TOP2AP11388 1531 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 EVI5O60447 810 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PSMA4P25789 261 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 EIF3CQ99613 913 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 KDM2BQ8NHM5 1336 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 POTEB3A0JP26 581 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 GTPBP10A4D1E9 387 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 TNNI1P19237 187 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 CASP2P42575 452 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 POTEBQ6S5H4 581 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 RRM2BQ7LG56 351 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PANK2Q9BZ23 570 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 LRRIQ3A6PVS8 624 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 CREB3O43889 395 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 BNIP3LO60238 219 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 BCAR3O75815 825 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SH3BGRP55822 239 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 FRA10AC1Q70Z53 315 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 CNPY4Q8N129 248 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 FOXP3Q9BZS1 431 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PDZRN3Q9UPQ7 1066 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 MRPL11Q9Y3B7 192 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 GRXCR2A6NFK2 248 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 FOSP01100 380 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 ATP1A1P05023 1023 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 TTBK2Q6IQ55 1244 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PPP1R13BQ96KQ4 1090 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 CEP19Q96LK0 163 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 RILPQ96NA2 401 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 UIMC1Q96RL1 719 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 OSBPL10Q9BXB5 764 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 UTP11Q9Y3A2 253 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 DAAM1Q9Y4D1 1078 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ACEP12821 1306 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SUN1O94901 812 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 CCDC122Q5T0U0 273 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 C2CD5Q86YS7 1000 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PDZD8Q8NEN9 1154 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ANKRD36BP1Q96IX9 119 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 KIFC3Q9BVG8 833 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 FOXO3O43524 673 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 FLOT1O75955 427 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 LMNB2Q03252 620 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SZRD1Q7Z422 152 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 LRRC4Q9HBW1 653 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 RAB20Q9NX57 234 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DYRK3O43781 588 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ZBTB17Q13105 803 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 RAPGEF1Q13905 1077 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SLC9C1Q4G0N8 1177 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ARMCX2Q7L311 632 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SH3TC2Q8TF17 1288 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 TSEN34Q9BSV6 310 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 DMAP1Q9NPF5 467 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 CHCHD3Q9NX63 227 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 A0A1B0GW55 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PSMD14O00487 310 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4L2P0CJ85 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4L3P0CJ86 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4L4P0CJ87 422 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4L5P0CJ88 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4L6P0CJ89 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4L7P0CJ90 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SNW1Q13573 536 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 ZNF568Q3ZCX4 644 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SENP1Q9P0U3 644 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 DUX4Q9UBX2 424 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 PRG4Q92954 1404 aaPredicted RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 KRT26Q7Z3Y9 468 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 AAASQ9NRG9 546 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 IARS2Q9NSE4 1012 aaKnown RBP3.77□□□□□ -1.81
NEB-201ENST00000172853 RNF207Q6ZRF8 634 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 RUFY3Q7L099 469 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 TRIM48Q8IWZ4 208 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 ZBTB18Q99592 522 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 SPATA16Q9BXB7 569 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 POLE3Q9NRF9 147 aa3.77□□□□□ -1.81
NEB-201ENST00000172853 MPOP05164 745 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 SCG2P13521 617 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 THOC5Q13769 683 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 TRIM14Q14142 442 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 FBXO18Q8NFZ0 1043 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 AKT3Q9Y243 479 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PARP10Q53GL7 1025 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 TMC6Q7Z403 805 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 RBSNQ9H1K0 784 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 BIVM-ERCC5R4GMW8 1640 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PLEKHH2Q8IVE3 1493 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 TESPA1A2RU30 521 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 MYL3P08590 195 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 GTF2A1P52655 376 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 MIER3Q7Z3K6 550 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 BTN2A2Q8WVV5 523 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 DHX38Q92620 1227 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms