RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
NECAP1-223ENST00000640091 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
NECAP1-223ENST00000640091 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
NECAP1-223ENST00000640091 SPICE1Q8N0Z3 855 aa12.09□□□□□ -0.47
NECAP1-223ENST00000640091 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
NECAP1-223ENST00000640091 SLC1A4P43007 532 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 ZNF543Q08ER8 600 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 PRKG1Q13976 671 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 CCDC96Q2M329 555 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.47
NECAP1-223ENST00000640091 OXER1Q8TDS5 423 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 PIGSQ96S52 555 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 LZTS2Q9BRK4 669 aa12.08□□□□□ -0.47
NECAP1-223ENST00000640091 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.47
NECAP1-223ENST00000640091 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
NECAP1-223ENST00000640091 XBP1P17861 261 aa12.08□□□□□ -0.48
NECAP1-223ENST00000640091 INPP5BP32019 993 aa12.08□□□□□ -0.48
NECAP1-223ENST00000640091 NR5A1Q13285 461 aa12.08□□□□□ -0.48
NECAP1-223ENST00000640091 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
NECAP1-223ENST00000640091 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
NECAP1-223ENST00000640091 GZF1Q9H116 711 aaPredicted RBP12.08□□□□□ -0.48
NECAP1-223ENST00000640091 DDX49Q9Y6V7 483 aaKnown RBP12.08□□□□□ -0.48
NECAP1-223ENST00000640091 ADAMTS3O15072 1205 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 NDUFB10O96000 172 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 SAFBQ15424 915 aaKnown RBP eCLIP12.07□□□□□ -0.48
NECAP1-223ENST00000640091 KIAA1755Q5JYT7 1200 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 HEATR3Q7Z4Q2 680 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
NECAP1-223ENST00000640091 DCPSQ96C86 337 aaKnown RBP12.07□□□□□ -0.48
NECAP1-223ENST00000640091 USP28Q96RU2 1077 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 PHF20Q9BVI0 1012 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 TCHHQ07283 1943 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 ADM5C9JUS6 153 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 ASNSP08243 561 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.488e-10■■■■■ 29.3
NECAP1-223ENST00000640091 EPHX2P34913 555 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 NLRP5P59047 1200 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 WWC2Q6AWC2 1192 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 GPT2Q8TD30 523 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
NECAP1-223ENST00000640091 SPATA32Q96LK8 384 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 ARHGEF10LQ9HCE6 1279 aa12.07□□□□□ -0.48
NECAP1-223ENST00000640091 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
NECAP1-223ENST00000640091 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
NECAP1-223ENST00000640091 EAPPQ56P03 285 aaPredicted RBP12.06□□□□□ -0.48
NECAP1-223ENST00000640091 GPATCH4Q5T3I0 446 aaKnown RBP12.06□□□□□ -0.48
NECAP1-223ENST00000640091 MYSM1Q5VVJ2 828 aa12.06□□□□□ -0.48
NECAP1-223ENST00000640091 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
NECAP1-223ENST00000640091 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
NECAP1-223ENST00000640091 JMJD4Q9H9V9 463 aa12.06□□□□□ -0.48
NECAP1-223ENST00000640091 CFAP45Q9UL16 551 aa12.06□□□□□ -0.48
NECAP1-223ENST00000640091 TMX2Q9Y320 296 aa12.06□□□□□ -0.48
NECAP1-223ENST00000640091 POTECB2RU33 542 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 NPY5RQ15761 445 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 EARS2Q5JPH6 523 aaKnown RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 GMCL1P1Q8NEA9 526 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 LEO1Q8WVC0 666 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 SCAND2PQ9GZW5 306 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 CLIC4Q9Y696 253 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 PTMSP20962 102 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 SNAP25P60880 206 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 DGKZQ13574 1117 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 NOM1Q5C9Z4 860 aaKnown RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 KRT26Q7Z3Y9 468 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 ZNF396Q96N95 335 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 ZNF341Q9BYN7 854 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 FOXP1Q9H334 677 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-223ENST00000640091 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
NECAP1-223ENST00000640091 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 BMP3P12645 472 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 ATP2B1P20020 1258 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 KRT2P35908 639 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
NECAP1-223ENST00000640091 SKOR2Q2VWA4 1001 aaPredicted RBP12.04□□□□□ -0.48
NECAP1-223ENST00000640091 SUPT20HL1Q3ZLR7 823 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 USP50Q70EL3 339 aaPredicted RBP12.04□□□□□ -0.48
NECAP1-223ENST00000640091 COA7Q96BR5 231 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 MYH4Q9Y623 1939 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 STXBP3O00186 592 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 FAM83BQ5T0W9 1011 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 KLRG1Q96E93 195 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms