RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 NCOR1O75376 2440 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 CHD9Q3L8U1 2897 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 CHD7Q9P2D1 2997 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 SLC15A5A6NIM6 579 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 DNM1LO00429 736 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 PEX10O60683 326 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 SURF6O75683 361 aaKnown RBP6.68□□□□□ -1.34
PDE4D-229ENST00000638939 IDH1O75874 414 aaKnown RBP6.68□□□□□ -1.34
PDE4D-229ENST00000638939 IGHA2P01877 340 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 SYN1P17600 705 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 PTPREP23469 700 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 DYNLL1P63167 89 aaKnown RBP6.68□□□□□ -1.34
PDE4D-229ENST00000638939 ATP8B2P98198 1209 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 MAP3K12Q12852 859 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 MCM6Q14566 821 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 LRRC26Q2I0M4 334 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 Q3C1V9 767 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 MFSD14CQ5VZR4 134 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 ASTLQ6HA08 431 aaPredicted RBP6.68□□□□□ -1.34
PDE4D-229ENST00000638939 TTC6Q86TZ1 520 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 LPAR1Q92633 364 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 CLUAP1Q96AJ1 413 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 UBE2OQ9C0C9 1292 aaKnown RBP6.68□□□□□ -1.34
PDE4D-229ENST00000638939 MTMR10Q9NXD2 777 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 DDX20Q9UHI6 824 aaKnown RBP6.68□□□□□ -1.34
PDE4D-229ENST00000638939 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
PDE4D-229ENST00000638939 TANC1Q9C0D5 1861 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 DLL1O00548 723 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 MS4A1P11836 297 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 CYBAP13498 195 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 SHMT1P34896 483 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 USP5P45974 858 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 GABPAQ06546 454 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 RAB3GAP1Q15042 981 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 ABCB5Q2M3G0 1257 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 CERKLQ49MI3 558 aaPredicted RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 OLFML2BQ68BL8 750 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 FAM109BQ6ICB4 259 aaPredicted RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 TYW1BQ6NUM6 668 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 CATSPERGQ6ZRH7 1159 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 ERC1Q8IUD2 1116 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 KCTD17Q8N5Z5 321 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 MAGEB6Q8N7X4 407 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 MIGA1Q8NAN2 632 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 SHCBP1Q8NEM2 672 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 EAF2Q96CJ1 260 aaPredicted RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 EDC3Q96F86 508 aaKnown RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 RIOK1Q9BRS2 568 aaKnown RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 CWC22Q9HCG8 908 aaKnown RBP6.67□□□□□ -1.34
PDE4D-229ENST00000638939 FLRT1Q9NZU1 646 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 BTBD7Q9P203 1132 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 IVNS1ABPQ9Y6Y0 642 aa6.67□□□□□ -1.34
PDE4D-229ENST00000638939 STRNO43815 780 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 FECHP22830 423 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 SSTR3P32745 418 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 GUCY1A2P33402 732 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 PLCD1P51178 756 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 MDM2Q00987 491 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 SNX17Q15036 470 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 TTF1Q15361 905 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 ZYXQ15942 572 aaKnown RBP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 CEP85Q6P2H3 762 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 Q7L0L9 218 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 ITPRIPQ8IWB1 547 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 ABRAQ8N0Z2 381 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 CCDC82Q8N4S0 544 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 MB21D1Q8N884 522 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 BANK1Q8NDB2 785 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 ACER1Q8TDN7 264 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 CRNKL1Q9BZJ0 848 aaKnown RBP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 RPAP3Q9H6T3 665 aaPredicted RBP6.66□□□□□ -1.34
PDE4D-229ENST00000638939 C1orf115Q9H7X2 142 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 CABP5Q9NP86 173 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 MYH6P13533 1939 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 XIRP2A4UGR9 3374 aa6.66□□□□□ -1.34
PDE4D-229ENST00000638939 LAMA4Q16363 1823 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 MAGEB6P1A0A0J9YX57 407 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 TCRBV5S4A2TA0A5A2 114 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 POTEB2H3BUK9 544 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 SEPT4O43236 478 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 RLBP1P12271 317 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 PDE6AP16499 860 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 ADORA2AP29274 412 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 ATP2B2Q01814 1243 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 TMEM259Q4ZIN3 620 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 HSP90AB4PQ58FF6 505 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 WDR78Q5VTH9 848 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 TMEM179Q6ZVK1 233 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 AACSQ86V21 672 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 TRPV1Q8NER1 839 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 NPLOC4Q8TAT6 608 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 MOV10L1Q9BXT6 1211 aaKnown RBP6.65□□□□□ -1.34
PDE4D-229ENST00000638939 SENP6Q9GZR1 1112 aaPredicted RBP6.65□□□□□ -1.34
PDE4D-229ENST00000638939 SPATC1LQ9H0A9 340 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 CCDC8Q9H0W5 538 aaPredicted RBP6.65□□□□□ -1.34
PDE4D-229ENST00000638939 ANTXR1Q9H6X2 564 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 SH2D4AQ9H788 454 aa6.65□□□□□ -1.34
PDE4D-229ENST00000638939 SWAP70Q9UH65 585 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms