RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 LMNTD2Q8IXW0 634 aa6.96□□□□□ -1.29
GABRB3-218ENST00000635994 SPDYE1Q8NFV5 336 aaPredicted RBP6.96□□□□□ -1.29
GABRB3-218ENST00000635994 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.29
GABRB3-218ENST00000635994 SNX29Q8TEQ0 813 aa6.96□□□□□ -1.29
GABRB3-218ENST00000635994 APPBP2Q92624 585 aa6.96□□□□□ -1.29
GABRB3-218ENST00000635994 CCDC124Q96CT7 223 aaKnown RBP6.96□□□□□ -1.29
GABRB3-218ENST00000635994 POLR2MP0CAP2 368 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 LIG4P49917 911 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 RASSF2P50749 326 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 CDKL2Q92772 493 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 TTC25Q96NG3 672 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 IRAK4Q9NWZ3 460 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 ASIC3Q9UHC3 531 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 CFAP65Q6ZU64 1925 aaKnown RBP6.96□□□□□ -1.3
GABRB3-218ENST00000635994 PLEKHG3A1L390 1219 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 CFBP00751 764 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 TERF1P54274 439 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 MYL5Q02045 173 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 HERC4Q5GLZ8 1057 aaPredicted RBP6.96□□□□□ -1.3
GABRB3-218ENST00000635994 CEP85LQ5SZL2 805 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 RINT1Q6NUQ1 792 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 FASTKD5Q7L8L6 764 aaKnown RBP6.96□□□□□ -1.3
GABRB3-218ENST00000635994 KRT222Q8N1A0 295 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 ELMOD1Q8N336 334 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 METTL13Q8N6R0 699 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 MCUR1Q96AQ8 359 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 CCDC17Q96LX7 622 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 ESYT1Q9BSJ8 1104 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 RAB20Q9NX57 234 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 ZFYVE9O95405 1425 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 STAM2O75886 525 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 ABL1P00519 1130 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 TMEM191BP0C7N4 346 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 PCP11498 1178 aaKnown RBP6.96□□□□□ -1.3
GABRB3-218ENST00000635994 GBP1P32455 592 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 NT5C2P49902 561 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 PDE1AP54750 535 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 CCDC122Q5T0U0 273 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 TBC1D9Q6ZT07 1266 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 NBPF11Q86T75 865 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 IFT20Q8IY31 132 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 RSAD2Q8WXG1 361 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 C1orf112Q9NSG2 853 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 LARSQ9P2J5 1176 aaKnown RBP6.96□□□□□ -1.3
GABRB3-218ENST00000635994 DNAI1Q9UI46 699 aa6.96□□□□□ -1.3
GABRB3-218ENST00000635994 ZNF215Q9UL58 517 aaPredicted RBP6.96□□□□□ -1.3
GABRB3-218ENST00000635994 PLA2R1Q13018 1463 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 AKR1B15C9JRZ8 316 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 CALCRLQ16602 461 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 FAM135BQ49AJ0 1406 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 EDC4Q6P2E9 1401 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 CHST3Q7LGC8 479 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 CACTINQ8WUQ7 758 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 UBLCP1Q8WVY7 318 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ATP6V0A1Q93050 837 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RSRC1Q96IZ7 334 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RUNDC3BQ96NL0 473 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 TRIM45Q9H8W5 580 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 SAP30BPQ9UHR5 308 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 GUCA1BQ9UMX6 200 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ANGPTL3Q9Y5C1 460 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ANKARQ7Z5J8 1434 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RNMTO43148 476 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 THAP12O43422 761 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 CCNT1O60563 726 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ATP2C2O75185 946 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ITGA6P23229 1130 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ANXA13P27216 316 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 IREB2P48200 963 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 SLC39A6Q13433 755 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RSRC2Q7L4I2 434 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 C2CD5Q86YS7 1000 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 REXO1Q8N1G1 1221 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RAB17Q9H0T7 212 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 METTL14Q9HCE5 456 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ZNF212Q9UDV6 495 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 TTLL3Q9Y4R7 772 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 LMTK2Q8IWU2 1503 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 MYOM2P54296 1465 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 M0R2C6 588 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 CUTAO60888 179 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 DNAJC8O75937 253 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RNF8O76064 485 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 F13A1P00488 732 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 CIITAP33076 1130 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 RNASELQ05823 741 aaKnown RBP6.95□□□□□ -1.3
GABRB3-218ENST00000635994 GOLGA8FQ08AF8 430 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 GOLGA8DPQ0D2H9 430 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 SURF1Q15526 300 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 ANKRD20A3Q5VUR7 823 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 MLKLQ8NB16 471 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 FAM76AQ8TAV0 307 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 OPTNQ96CV9 577 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 TEKT3Q9BXF9 490 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 SLC13A4Q9UKG4 626 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 VWA3AA6NCI4 1184 aa6.95□□□□□ -1.3
GABRB3-218ENST00000635994 DDX5P17844 614 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms