RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 RIOX1Q9H6W3 641 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 TDRD3Q9H7E2 651 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 BARHL2Q9NY43 387 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 PI4KBQ9UBF8 816 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 ARFGEF1Q9Y6D6 1849 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 STXBP3O00186 592 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 ENTPD3O75355 529 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 PARP1P09874 1014 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 TCP10Q12799 353 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 LARGE2Q8N3Y3 721 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 DAGLBQ8NCG7 672 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 GPKOWQ92917 476 aaPredicted RBP eCLIP14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 CPVLQ9H3G5 476 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 PIM2Q9P1W9 311 aa14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 SRPRBQ9Y5M8 271 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-219ENST00000635917 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 TTLL1O95922 423 aa14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 RBM5P52756 815 aaKnown RBP eCLIP14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 SOGA3Q5TF21 947 aa14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 ZNF579Q8NAF0 562 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 PIBF1Q8WXW3 757 aa14.37□□□□□ -0.11
CACNA1A-219ENST00000635917 AP5Z1O43299 807 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 RAD17O75943 681 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 CALML3P27482 149 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 TRAPPC10P48553 1259 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 NLRP5P59047 1200 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 ANO6Q4KMQ2 910 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 ANP32BQ92688 251 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 BRMS1Q9HCU9 246 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 TRIM75PA6NK02 468 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 FAM196BA6NMK8 535 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 FOXP4Q8IVH2 680 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 BLIDQ8IZY5 108 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 MKL1Q969V6 931 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 ZMYND12Q9H0C1 365 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 KIAA1468Q9P260 1216 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 ZNRF3Q9ULT6 936 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 MTMR7Q9Y216 660 aa14.36□□□□□ -0.11
CACNA1A-219ENST00000635917 SYKP43405 635 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 ASPRV1Q53RT3 343 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 GALNT17Q6IS24 598 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 LRRC47Q8N1G4 583 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 MTMR14Q8NCE2 650 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 ZBED3Q96IU2 234 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 CBX8Q9HC52 389 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 CLIP2Q9UDT6 1046 aa14.35□□□□□ -0.11
CACNA1A-219ENST00000635917 CAVIN2O95810 425 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 EIF6P56537 245 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 IQCB1Q15051 598 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 PIK3AP1Q6ZUJ8 805 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 DNAJC25Q9H1X3 360 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 USP25Q9UHP3 1055 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 NFKBIEO00221 500 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 BMP15O95972 392 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 ATP2C1P98194 919 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 CXCL9Q07325 125 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 TTC38Q5R3I4 469 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 C4orf32Q8N8J7 132 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 MTMR8Q96EF0 704 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 SDF4Q9BRK5 362 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 TUBE1Q9UJT0 475 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 PCDHA6Q9UN73 950 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 PCDHA8Q9Y5H6 950 aa14.34□□□□□ -0.11
CACNA1A-219ENST00000635917 POLD1P28340 1107 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 ZNF165P49910 485 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 JAG1P78504 1218 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 RRP1BQ14684 758 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 STX1AQ16623 288 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 LONRF3Q496Y0 759 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 DALRD3Q5D0E6 543 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 USP49Q70CQ1 688 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 PIGSQ96S52 555 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 NOL7Q9UMY1 257 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-219ENST00000635917 A0A087WWV3 80 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms