RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CSPG5O95196 566 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 CFAP221Q4G0U5 840 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 MGARPQ8TDB4 240 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 PLCB1Q9NQ66 1216 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 ARHGEF10O15013 1369 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 STAM2O75886 525 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 XRCC5P13010 732 aaKnown RBP12.96□□□□□ -0.34
SHPRH-211ENST00000629427 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.34
SHPRH-211ENST00000629427 DMP1Q13316 513 aaPredicted RBP12.96□□□□□ -0.34
SHPRH-211ENST00000629427 SH2D4BQ5SQS7 431 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.34
SHPRH-211ENST00000629427 COL17A1Q9UMD9 1497 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-211ENST00000629427 SKA2Q8WVK7 121 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-211ENST00000629427 RSRC1Q96IZ7 334 aaKnown RBP12.95□□□□□ -0.34
SHPRH-211ENST00000629427 PLEKHA4Q9H4M7 779 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 BABAM1Q9NWV8 329 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 KIF1BO60333 1816 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 USP17L12C9JPN9 530 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 USP17L21D6R901 530 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 POLR2MP0CAP2 368 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 ABCB4P21439 1286 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 NOP9Q86U38 636 aaKnown RBP12.95□□□□□ -0.34
SHPRH-211ENST00000629427 VPS37BQ9H9H4 285 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 PANK4Q9NVE7 773 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 K7ENM7 598 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 DTNBO60941 627 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 MTX1Q13505 466 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 PNMA6EA0A0J9YXQ4 647 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 TMOD1P28289 359 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 STAT1P42224 750 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 PNOCQ13519 176 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-211ENST00000629427 MAIP1Q8WWC4 291 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 RABEP2Q9H5N1 569 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 ANKFY1Q9P2R3 1169 aa12.95□□□□□ -0.34
SHPRH-211ENST00000629427 DDX25Q9UHL0 483 aaKnown RBP12.95□□□□□ -0.34
SHPRH-211ENST00000629427 DLATP10515 647 aaKnown RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 PCK1P35558 622 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 KRT40Q6A162 431 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 CTAGE3PQ8IX95 158 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 CBX8Q9HC52 389 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 AMFRQ9UKV5 643 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 ATF7P17544 494 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 RUFY4Q6ZNE9 571 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 KRBA2Q6ZNG9 492 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 TMTC1Q8IUR5 882 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 CEP120Q8N960 986 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 SEC24BO95487 1268 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 NFE2L3Q9Y4A8 694 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 JAK2O60674 1132 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 NXNQ6DKJ4 435 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 ZNF654Q8IZM8 581 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 CARD6Q9BX69 1037 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 GYG1P46976 350 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 FBXO11Q86XK2 927 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 SLF1Q9BQI6 1058 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 CCDC94Q9BW85 323 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 IFIH1Q9BYX4 1025 aaKnown RBP12.94□□□□□ -0.34
SHPRH-211ENST00000629427 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 PPP4R1Q8TF05 950 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 APOL6Q9BWW8 343 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 IMPACTQ9P2X3 320 aa12.94□□□□□ -0.34
SHPRH-211ENST00000629427 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 TXNDC9O14530 226 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 MAP7Q14244 749 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 CCDC84Q86UT8 332 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 MCF2L2Q86YR7 1114 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 RAB3IPQ96QF0 476 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 ZSCAN10Q96SZ4 725 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 SLAIN2Q9P270 581 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 CASQ2O14958 399 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 RAB20Q9NX57 234 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 AOX1Q06278 1338 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 SYNJ2BP-COX16A0A087WUM0 186 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 IFNB1P01574 187 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 PIK3CAP42336 1068 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms