RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 CHAF1AQ13111 956 aaPredicted RBP7.69□□□□□ -1.18
LINC00649-220ENST00000628906 RSPO4Q2I0M5 234 aaPredicted RBP7.69□□□□□ -1.18
LINC00649-220ENST00000628906 WDR78Q5VTH9 848 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 LURAP1LQ8IV03 231 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 CFAP53Q96M91 514 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 WNT8AQ9H1J5 351 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 SEMA4AQ9H3S1 761 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
LINC00649-220ENST00000628906 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 USP40Q9NVE5 1235 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 TMOD4Q9NZQ9 345 aa7.69□□□□□ -1.18
LINC00649-220ENST00000628906 NBEAQ8NFP9 2946 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 A0A0U1RQG5 324 aaPredicted RBP7.68□□□□□ -1.18
LINC00649-220ENST00000628906 MBTPS2O43462 519 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 PLIN1O60240 522 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 ZIC2O95409 532 aaPredicted RBP7.68□□□□□ -1.18
LINC00649-220ENST00000628906 CAP2P40123 477 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 RGS3P49796 1198 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 ERVK-21P61565 698 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 MTMR2Q13614 643 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 CBX2Q14781 532 aaPredicted RBP7.68□□□□□ -1.18
LINC00649-220ENST00000628906 RIPOR3Q96MK2 946 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 PLEKHF1Q96S99 279 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 NOC4LQ9BVI4 516 aaKnown RBP7.68□□□□□ -1.18
LINC00649-220ENST00000628906 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
LINC00649-220ENST00000628906 ROBO3Q96MS0 1386 aa7.68□□□□□ -1.18
LINC00649-220ENST00000628906 COL4A4P53420 1690 aaPredicted RBP7.67□□□□□ -1.18
LINC00649-220ENST00000628906 A0A1B0GUL6 1792 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 STXBP3O00186 592 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 CHL1O00533 1208 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 LMNAP02545 664 aaKnown RBP7.67□□□□□ -1.18
LINC00649-220ENST00000628906 NEFMP07197 916 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 SDHBP21912 280 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 CST5P28325 142 aaPredicted RBP7.67□□□□□ -1.18
LINC00649-220ENST00000628906 ATXN1P54253 815 aaKnown RBP7.67□□□□□ -1.18
LINC00649-220ENST00000628906 RRP1BQ14684 758 aaKnown RBP7.67□□□□□ -1.18
LINC00649-220ENST00000628906 LBX2Q6XYB7 198 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 UBE3BQ7Z3V4 1068 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
LINC00649-220ENST00000628906 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 SLC5A4Q9NY91 659 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 CTNNA3Q9UI47 895 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 TNKSO95271 1327 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 MYO7AQ13402 2215 aa7.67□□□□□ -1.18
LINC00649-220ENST00000628906 DSPP15924 2871 aaKnown RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 LOC730098B7Z3J9 87 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 USP17L10C9JJH3 530 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 PDGFBP01127 241 aaPredicted RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 ZNF865P0CJ78 1059 aaPredicted RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 AKR1A1P14550 325 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 CASP7P55210 303 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 IFIT5Q13325 482 aaKnown RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 COL9A3Q14050 684 aaPredicted RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 CTC1Q2NKJ3 1217 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 IFNLR1Q8IU57 520 aaPredicted RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 MRPL38Q96DV4 380 aaKnown RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 MAML3Q96JK9 1138 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 TGS1Q96RS0 853 aaKnown RBP7.66□□□□□ -1.18
LINC00649-220ENST00000628906 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 DOCK2Q92608 1830 aa7.66□□□□□ -1.18
LINC00649-220ENST00000628906 NCK2O43639 380 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 FRAT2O75474 233 aaPredicted RBP7.65□□□□□ -1.18
LINC00649-220ENST00000628906 ASGR1P07306 291 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 ACTN1P12814 892 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
LINC00649-220ENST00000628906 GCKRQ14397 625 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 DIXDC1Q155Q3 683 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 RFX7Q2KHR2 1363 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 LDHAL6AQ6ZMR3 332 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 VPS37DQ86XT2 251 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 ABRAQ8N0Z2 381 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 TMEM105Q8N8V8 129 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 PCSK9Q8NBP7 692 aaKnown RBP7.65□□□□□ -1.18
LINC00649-220ENST00000628906 BANK1Q8NDB2 785 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 VTI1AQ96AJ9 217 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 SCLYQ96I15 445 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 EMILIN3Q9NT22 766 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 SYNRGQ9UMZ2 1314 aa7.65□□□□□ -1.18
LINC00649-220ENST00000628906 CYSRT1A8MQ03 144 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 NEURL1BA8MQ27 555 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 DMWDQ09019 674 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 SMAD4Q13485 552 aaKnown RBP7.64□□□□□ -1.19
LINC00649-220ENST00000628906 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
LINC00649-220ENST00000628906 TIGD5Q53EQ6 642 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 EP400NLQ6ZTU2 488 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 KCNG4Q8TDN1 519 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 LENG1Q96BZ8 264 aaPredicted RBP7.64□□□□□ -1.19
LINC00649-220ENST00000628906 DDX4Q9NQI0 724 aaKnown RBP7.64□□□□□ -1.19
LINC00649-220ENST00000628906 CLDND1Q9NY35 253 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 TIMELESSQ9UNS1 1208 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 MAP3K2Q9Y2U5 619 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 ZNF236Q9UL36 1845 aa7.64□□□□□ -1.19
LINC00649-220ENST00000628906 LINC01553A4QN01 128 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 MYADML2A6NDP7 307 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 FAM196BA6NMK8 535 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L15C9J2P7 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L13C9JLJ4 530 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms