RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EBAG9O00559 213 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 UBXN1Q04323 297 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 PAK1Q13153 545 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 EARS2Q5JPH6 523 aaKnown RBP15.86■□□□□ 0.13
LDB3-209ENST00000623056 METTL24Q5JXM2 366 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 JAKMIP2Q96AA8 810 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 SHISA4Q96DD7 197 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 PPFIA1Q13136 1202 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 WTAPQ15007 396 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 IFNL3Q8IZI9 196 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 CAGE1Q8TC20 777 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 FERMT2Q96AC1 680 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 NAPBQ9H115 298 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 EHD4Q9H223 541 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 CNNM2Q9H8M5 875 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 RRP12Q5JTH9 1297 aaKnown RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 NELFBQ8WX92 580 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 ZNF512BQ96KM6 892 aaPredicted RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 CEP89Q96ST8 783 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 DNAJC7Q99615 494 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 CAPS2Q9BXY5 557 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 KRT23Q9C075 422 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 SOS2Q07890 1332 aaPredicted RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 CHD4Q14839 1912 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 WNT7AO00755 349 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 AENQ8WTP8 325 aaKnown RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 NUP133Q8WUM0 1156 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 ISCA1Q9BUE6 129 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 GNL3LQ9NVN8 582 aaKnown RBP15.85■□□□□ 0.13
LDB3-209ENST00000623056 GRIN2DO15399 1336 aa15.85■□□□□ 0.13
LDB3-209ENST00000623056 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 PATL2C9JE40 543 aaKnown RBP15.84■□□□□ 0.13
LDB3-209ENST00000623056 ZNF185O15231 689 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 FANCBQ8NB91 859 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 EHBP1Q8NDI1 1231 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 BCAS4Q8TDM0 211 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 VPS54Q9P1Q0 977 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 FAM184BQ9ULE4 1060 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 LUC7L2Q9Y383 392 aaKnown RBP15.84■□□□□ 0.13
LDB3-209ENST00000623056 EIF3HO15372 352 aaKnown RBP eCLIP15.84■□□□□ 0.13
LDB3-209ENST00000623056 C2orf54Q08AI8 447 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 WDR59Q6PJI9 974 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 KIAA1328Q86T90 577 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 RABEP2Q9H5N1 569 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 RIPOR2Q9Y4F9 1068 aa15.84■□□□□ 0.13
LDB3-209ENST00000623056 GNGT1P63211 74 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 KRT83P78385 493 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 ZNF662Q6ZS27 426 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 CCDC91Q7Z6B0 441 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 ZNF654Q8IZM8 581 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 GPATCH11Q8N954 259 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 FAM89AQ96GI7 184 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 SHTN1A0MZ66 631 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 RCCD1A6NED2 376 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 MBD4O95243 580 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 BMP15O95972 392 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 CSF1RP07333 972 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 HNRNPH1P31943 449 aaKnown RBP15.83■□□□□ 0.12
LDB3-209ENST00000623056 KRT2P35908 639 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 ZNF174Q15697 407 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 FBXW10Q5XX13 1052 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 GBP6Q6ZN66 633 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 MTRQ99707 1265 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 HINFPQ9BQA5 517 aa15.83■□□□□ 0.12
LDB3-209ENST00000623056 TIAM2Q8IVF5 1701 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 ERICH2A1L162 156 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 KRT86O43790 486 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 GTPBP6O43824 516 aaPredicted RBP15.82■□□□□ 0.12
LDB3-209ENST00000623056 PARP1P09874 1014 aaKnown RBP15.82■□□□□ 0.12
LDB3-209ENST00000623056 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 KCNV1Q6PIU1 500 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 LDHAL6AQ6ZMR3 332 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 SND1Q7KZF4 910 aaKnown RBP eCLIP15.82■□□□□ 0.12
LDB3-209ENST00000623056 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 LACRTQ9GZZ8 138 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 CAPN11Q9UMQ6 739 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 MYH6P13533 1939 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 ANO9A1A5B4 782 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 LGALS16A8MUM7 142 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 PHKA1P46020 1223 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 TCIRG1Q13488 830 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 TSR1Q2NL82 804 aaKnown RBP15.82■□□□□ 0.12
LDB3-209ENST00000623056 ZNF658Q5TYW1 1059 aaPredicted RBP15.82■□□□□ 0.12
LDB3-209ENST00000623056 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 STAG1Q8WVM7 1258 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 RRP36Q96EU6 259 aaKnown RBP15.82■□□□□ 0.12
LDB3-209ENST00000623056 PHF20Q9BVI0 1012 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 RNF26Q9BY78 433 aaPredicted RBP15.82■□□□□ 0.12
LDB3-209ENST00000623056 ARMT1Q9H993 441 aa15.82■□□□□ 0.12
LDB3-209ENST00000623056 A0A1W2PQC6 194 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 GSG1L2A8MUP6 293 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 GOLGA8KD6RF30 607 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms