RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PI4K2BQ8TCG2 481 aa8.82□□□□□ -1
VPS11-209ENST00000622309 RNPC3Q96LT9 517 aaKnown RBP8.82□□□□□ -1
VPS11-209ENST00000622309 B4DLN1 442 aa8.82□□□□□ -1
VPS11-209ENST00000622309 H7C1W4 665 aa8.82□□□□□ -1
VPS11-209ENST00000622309 DNM1LO00429 736 aa8.82□□□□□ -1
VPS11-209ENST00000622309 LIN7AO14910 233 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
VPS11-209ENST00000622309 EPB41P11171 864 aaKnown RBP8.82□□□□□ -1
VPS11-209ENST00000622309 SCTRP47872 440 aa8.82□□□□□ -1
VPS11-209ENST00000622309 CTCFP49711 727 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 XRCC4Q13426 336 aa8.82□□□□□ -1
VPS11-209ENST00000622309 TAX1BP1Q86VP1 789 aa8.82□□□□□ -1
VPS11-209ENST00000622309 CAPZA3Q96KX2 299 aa8.82□□□□□ -1
VPS11-209ENST00000622309 SLC27A2O14975 620 aa8.82□□□□□ -1
VPS11-209ENST00000622309 KIF5BP33176 963 aa8.82□□□□□ -1
VPS11-209ENST00000622309 MXRA7P84157 204 aa8.82□□□□□ -1
VPS11-209ENST00000622309 TOB2Q14106 344 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 SETDB1Q15047 1291 aa8.82□□□□□ -1
VPS11-209ENST00000622309 CCDC57Q2TAC2 916 aa8.82□□□□□ -1
VPS11-209ENST00000622309 AMOTQ4VCS5 1084 aa8.82□□□□□ -1
VPS11-209ENST00000622309 ACBD5Q5T8D3 534 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 IQCEQ6IPM2 695 aa8.82□□□□□ -1
VPS11-209ENST00000622309 CRELD2Q6UXH1 353 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 PNMA8AQ86V59 439 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 TRIM42Q8IWZ5 723 aa8.82□□□□□ -1
VPS11-209ENST00000622309 MIPOL1Q8TD10 442 aa8.82□□□□□ -1
VPS11-209ENST00000622309 RBM41Q96IZ5 413 aaKnown RBP8.82□□□□□ -1
VPS11-209ENST00000622309 GORASP1Q9BQQ3 440 aa8.82□□□□□ -1
VPS11-209ENST00000622309 POLD4Q9HCU8 107 aa8.82□□□□□ -1
VPS11-209ENST00000622309 PPANQ9NQ55 473 aaKnown RBP8.82□□□□□ -1
VPS11-209ENST00000622309 INTS13Q9NVM9 706 aa8.82□□□□□ -1
VPS11-209ENST00000622309 ZFATQ9P243 1243 aa8.82□□□□□ -1
VPS11-209ENST00000622309 KLF15Q9UIH9 416 aa8.82□□□□□ -1
VPS11-209ENST00000622309 LRRD1A4D1F6 860 aa8.81□□□□□ -1
VPS11-209ENST00000622309 RNF8O76064 485 aa8.81□□□□□ -1
VPS11-209ENST00000622309 FMNL1O95466 1100 aaPredicted RBP8.81□□□□□ -1
VPS11-209ENST00000622309 CLTAP09496 248 aa8.81□□□□□ -1
VPS11-209ENST00000622309 ATP4AP20648 1035 aa8.81□□□□□ -1
VPS11-209ENST00000622309 ELF3P78545 371 aaPredicted RBP8.81□□□□□ -1
VPS11-209ENST00000622309 GUCY1B3Q02153 619 aa8.81□□□□□ -1
VPS11-209ENST00000622309 TTMPQ5BVD1 217 aa8.81□□□□□ -1
VPS11-209ENST00000622309 C6orf89Q6UWU4 347 aa8.81□□□□□ -1
VPS11-209ENST00000622309 KDM7AQ6ZMT4 941 aa8.81□□□□□ -1
VPS11-209ENST00000622309 RASGRP2Q7LDG7 609 aa8.81□□□□□ -1
VPS11-209ENST00000622309 SAPCD2Q86UD0 394 aa8.81□□□□□ -1
VPS11-209ENST00000622309 CYFIP2Q96F07 1278 aa8.81□□□□□ -1
VPS11-209ENST00000622309 MMS19Q96T76 1030 aa8.81□□□□□ -1
VPS11-209ENST00000622309 MMTAG2Q9BU76 263 aaKnown RBP8.81□□□□□ -1
VPS11-209ENST00000622309 KIAA1522Q9P206 1035 aaPredicted RBP8.81□□□□□ -1
VPS11-209ENST00000622309 ANKRD26Q9UPS8 1709 aa8.81□□□□□ -1
VPS11-209ENST00000622309 MST1RQ04912 1400 aa8.81□□□□□ -1
VPS11-209ENST00000622309 MAP3K19Q56UN5 1328 aa8.81□□□□□ -1
VPS11-209ENST00000622309 DIAPH2O60879 1101 aa8.81□□□□□ -1
VPS11-209ENST00000622309 LINGO3P0C6S8 592 aa8.81□□□□□ -1
VPS11-209ENST00000622309 BLMHQ13867 455 aa8.81□□□□□ -1
VPS11-209ENST00000622309 CCDC38Q502W7 563 aa8.81□□□□□ -1
VPS11-209ENST00000622309 AKNAD1Q5T1N1 836 aa8.81□□□□□ -1
VPS11-209ENST00000622309 KCNG4Q8TDN1 519 aa8.81□□□□□ -1
VPS11-209ENST00000622309 HINFPQ9BQA5 517 aa8.81□□□□□ -1
VPS11-209ENST00000622309 ZCWPW1Q9H0M4 648 aa8.81□□□□□ -1
VPS11-209ENST00000622309 MMADHCQ9H3L0 296 aaPredicted RBP8.81□□□□□ -1
VPS11-209ENST00000622309 IGSF5Q9NSI5 407 aa8.81□□□□□ -1
VPS11-209ENST00000622309 PPFIA3O75145 1194 aa8.81□□□□□ -1
VPS11-209ENST00000622309 GLRX3O76003 335 aaKnown RBP8.81□□□□□ -1
VPS11-209ENST00000622309 NR1D1P20393 614 aa8.81□□□□□ -1
VPS11-209ENST00000622309 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
VPS11-209ENST00000622309 MTHFD1LQ6UB35 978 aa8.81□□□□□ -1
VPS11-209ENST00000622309 SDCCAG8Q86SQ7 713 aaPredicted RBP8.81□□□□□ -1
VPS11-209ENST00000622309 GALNT15Q8N3T1 639 aa8.81□□□□□ -1
VPS11-209ENST00000622309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.81□□□□□ -1
VPS11-209ENST00000622309 USHBP1Q8N6Y0 703 aa8.81□□□□□ -1
VPS11-209ENST00000622309 FAM167BQ9BTA0 163 aa8.81□□□□□ -1
VPS11-209ENST00000622309 OSBPL7Q9BZF2 842 aa8.81□□□□□ -1
VPS11-209ENST00000622309 L3MBTL1Q9Y468 752 aa8.81□□□□□ -1
VPS11-209ENST00000622309 SAR1BQ9Y6B6 198 aa8.81□□□□□ -1
VPS11-209ENST00000622309 RASSF10A6NK89 507 aa8.8□□□□□ -1
VPS11-209ENST00000622309 MYL1P05976 194 aa8.8□□□□□ -1
VPS11-209ENST00000622309 MDH1P40925 334 aaKnown RBP8.8□□□□□ -1
VPS11-209ENST00000622309 CACNA2D3Q8IZS8 1091 aa8.8□□□□□ -1
VPS11-209ENST00000622309 ABTB2Q8N961 1025 aa8.8□□□□□ -1
VPS11-209ENST00000622309 HVCN1Q96D96 273 aa8.8□□□□□ -1
VPS11-209ENST00000622309 RRP36Q96EU6 259 aaKnown RBP8.8□□□□□ -1
VPS11-209ENST00000622309 DUSP9Q99956 384 aaKnown RBP8.8□□□□□ -1
VPS11-209ENST00000622309 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
VPS11-209ENST00000622309 USP21Q9UK80 565 aa8.8□□□□□ -1
VPS11-209ENST00000622309 CDC42BPGQ6DT37 1551 aa8.8□□□□□ -1
VPS11-209ENST00000622309 A1BGP04217 495 aa8.8□□□□□ -1
VPS11-209ENST00000622309 AMPD2Q01433 879 aa8.8□□□□□ -1
VPS11-209ENST00000622309 G3BP1Q13283 466 aaKnown RBP eCLIP8.8□□□□□ -11e-6■■■■□ 23
VPS11-209ENST00000622309 C11orf96Q7Z7L8 435 aa8.8□□□□□ -1
VPS11-209ENST00000622309 KIAA0825Q8IV33 1275 aa8.8□□□□□ -1
VPS11-209ENST00000622309 CCDC63Q8NA47 563 aa8.8□□□□□ -1
VPS11-209ENST00000622309 RHPN1Q8TCX5 695 aa8.8□□□□□ -1
VPS11-209ENST00000622309 AENQ8WTP8 325 aaKnown RBP8.8□□□□□ -1
VPS11-209ENST00000622309 P3H4Q92791 437 aa8.8□□□□□ -1
VPS11-209ENST00000622309 DTNBP1Q96EV8 351 aa8.8□□□□□ -1
VPS11-209ENST00000622309 BICD1Q96G01 975 aa8.8□□□□□ -1
VPS11-209ENST00000622309 ZNF570Q96NI8 536 aa8.8□□□□□ -1
VPS11-209ENST00000622309 GUCA1BQ9UMX6 200 aa8.8□□□□□ -1
VPS11-209ENST00000622309 U3KPZ7 1027 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms