RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 PTPROQ16827 1216 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ST3GAL2Q16842 350 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 CTC1Q2NKJ3 1217 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ZNF792Q3KQV3 632 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 GNASQ5JWF2 1037 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 WDR78Q5VTH9 848 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 SPTY2D1Q68D10 685 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 MAMDC4Q6UXC1 1216 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 CCDC84Q86UT8 332 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 RMDN1Q96DB5 314 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ZNF594Q96JF6 807 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 TGS1Q96RS0 853 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 RAD9AQ99638 391 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 NOC4LQ9BVI4 516 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 MOV10L1Q9BXT6 1211 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 PPP1R12CQ9BZL4 782 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 KIAA1683Q9H0B3 1180 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 CERS4Q9HA82 394 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 DDX4Q9NQI0 724 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 TLR9Q9NR96 1032 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 MBIPQ9NS73 344 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 BTBD7Q9P203 1132 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 DENND2AQ9ULE3 1009 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 IQSEC3Q9UPP2 1182 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 CNPY2Q9Y2B0 182 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 LAS1LQ9Y4W2 734 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 NDUFB9Q9Y6M9 179 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 NCOR2Q9Y618 2525 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 PSME4Q14997 1843 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ZFHX4Q86UP3 3567 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 DCHS1Q96JQ0 3298 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 DDX60LQ5H9U9 1706 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ZBBXA8MT70 800 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 LOC730098B7Z3J9 87 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 APBB1O00213 710 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ELL2O00472 640 aaPredicted RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 PARNO95453 639 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 EYA4O95677 639 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 SLURP2P0DP57 97 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 PRDX5P30044 214 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 LTBRP36941 435 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 CCL23P55773 120 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ITGA7Q13683 1181 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 TTLL4Q14679 1199 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 PUM3Q15397 648 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 BEND3Q5T5X7 828 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 KIAA0319Q5VV43 1072 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ZNF467Q7Z7K2 595 aaPredicted RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 MAGEB6Q8N7X4 407 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 VGLL2Q8N8G2 317 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 C8orf58Q8NAV2 365 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 BANK1Q8NDB2 785 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 DNAAF4Q8WXU2 420 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 LPIN2Q92539 896 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 MRPL38Q96DV4 380 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ASIC4Q96FT7 647 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 RIPOR3Q96MK2 946 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 SAMD11Q96NU1 681 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 STK31Q9BXU1 1019 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 PUS3Q9BZE2 481 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 TANGO6Q9C0B7 1094 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 SPATC1LQ9H0A9 340 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 UPF3AQ9H1J1 476 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 FAM86C1Q9NVL1 165 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 IFT57Q9NWB7 429 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 MUTYHQ9UIF7 546 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 FBXO3Q9UK99 471 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ADAMTS5Q9UNA0 930 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 CHMP3Q9Y3E7 222 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 Q9Y3F1 56 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ZSWIM8A7E2V4 1837 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 FAM186AA6NE01 2351 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 PRRC2BQ5JSZ5 2229 aaKnown RBP2.97□□□□□ -1.93
CPNE3-211ENST00000621526 ROBO3Q96MS0 1386 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 WDR87Q6ZQQ6 2873 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 MYO9BQ13459 2157 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 GVINP1Q7Z2Y8 2422 aa2.97□□□□□ -1.93
CPNE3-211ENST00000621526 TRIOO75962 3097 aa2.96□□□□□ -1.93
CPNE3-211ENST00000621526 FASNP49327 2511 aaKnown RBP2.96□□□□□ -1.93
CPNE3-211ENST00000621526 PDS5AQ29RF7 1337 aaKnown RBP2.96□□□□□ -1.93
CPNE3-211ENST00000621526 FLNBO75369 2602 aaKnown RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 UNC79Q9P2D8 2635 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 REV3LO60673 3130 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 CFAP47Q6ZTR5 3102 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ABHD14A-ACY1A0A1B0GW23 586 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 SPDYE16A6NNV3 312 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 H3BNC9 293 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 H3BQ06 376 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 STXBP3O00186 592 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 GRM8O00222 908 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 PITPNM1O00562 1244 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 CTAGE5O15320 804 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 MBTPS2O43462 519 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ZEB2O60315 1214 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 EFCAB14O75071 495 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ALDH1L1O75891 902 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 GJB5O95377 273 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 SNAI1O95863 264 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 LMNAP02545 664 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms