RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
CBWD3-216ENST00000621396 DCPSQ96C86 337 aaKnown RBP18.41■□□□□ 0.54
CBWD3-216ENST00000621396 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
CBWD3-216ENST00000621396 BTBD18B2RXH4 712 aa18.41■□□□□ 0.54
CBWD3-216ENST00000621396 SLC1A4P43007 532 aa18.41■□□□□ 0.54
CBWD3-216ENST00000621396 NR5A1Q13285 461 aa18.41■□□□□ 0.54
CBWD3-216ENST00000621396 SLFN13Q68D06 897 aa18.41■□□□□ 0.54
CBWD3-216ENST00000621396 WRNIP1Q96S55 665 aa18.41■□□□□ 0.54
CBWD3-216ENST00000621396 MYH4Q9Y623 1939 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 TRIM29Q14134 588 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 TYW1BQ6NUM6 668 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
CBWD3-216ENST00000621396 KRT26Q7Z3Y9 468 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 ZNF526Q8TF50 670 aaPredicted RBP18.4■□□□□ 0.54
CBWD3-216ENST00000621396 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 L3MBTL3Q96JM7 780 aaPredicted RBP18.4■□□□□ 0.54
CBWD3-216ENST00000621396 PIGSQ96S52 555 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 MAP3K14Q99558 947 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 NDUFB10O96000 172 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 SNHG28P0DPA3 235 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 SNAP25P60880 206 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
CBWD3-216ENST00000621396 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 SULF1Q8IWU6 871 aa18.4■□□□□ 0.54
CBWD3-216ENST00000621396 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
CBWD3-216ENST00000621396 GADD45BO75293 160 aaPredicted RBP18.39■□□□□ 0.53
CBWD3-216ENST00000621396 SCG2P13521 617 aa18.39■□□□□ 0.53
CBWD3-216ENST00000621396 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
CBWD3-216ENST00000621396 GNL2Q13823 731 aaKnown RBP18.39■□□□□ 0.53
CBWD3-216ENST00000621396 HEATR3Q7Z4Q2 680 aa18.39■□□□□ 0.53
CBWD3-216ENST00000621396 WASF1Q92558 559 aa18.39■□□□□ 0.53
CBWD3-216ENST00000621396 TAF1DQ9H5J8 278 aaPredicted RBP18.39■□□□□ 0.53
CBWD3-216ENST00000621396 ASNSP08243 561 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 PFKFB3Q16875 520 aaPredicted RBP18.38■□□□□ 0.53
CBWD3-216ENST00000621396 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
CBWD3-216ENST00000621396 DIS3L2Q8IYB7 885 aaKnown RBP18.38■□□□□ 0.53
CBWD3-216ENST00000621396 ZNF341Q9BYN7 854 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 LMBRD1Q9NUN5 540 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 SSC5DA1L4H1 1573 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 USP17L10C9JJH3 530 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 MMP1P03956 469 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 GNAQP50148 359 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 MOB2Q70IA6 237 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
CBWD3-216ENST00000621396 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
CBWD3-216ENST00000621396 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
CBWD3-216ENST00000621396 FAM205CA6NFA0 338 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 TAL1P17542 331 aaPredicted RBP18.37■□□□□ 0.53
CBWD3-216ENST00000621396 ASPRV1Q53RT3 343 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
CBWD3-216ENST00000621396 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
CBWD3-216ENST00000621396 EARS2Q5JPH6 523 aaKnown RBP18.36■□□□□ 0.53
CBWD3-216ENST00000621396 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
CBWD3-216ENST00000621396 GZF1Q9H116 711 aaPredicted RBP18.36■□□□□ 0.53
CBWD3-216ENST00000621396 JMJD4Q9H9V9 463 aa18.36■□□□□ 0.53
CBWD3-216ENST00000621396 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
CBWD3-216ENST00000621396 MYH6P13533 1939 aa18.36■□□□□ 0.53
CBWD3-216ENST00000621396 CTNND1O60716 968 aaKnown RBP18.35■□□□□ 0.53
CBWD3-216ENST00000621396 PDIA4P13667 645 aaKnown RBP18.35■□□□□ 0.53
CBWD3-216ENST00000621396 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 DCAF15Q66K64 600 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 USP50Q70EL3 339 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-216ENST00000621396 COA7Q96BR5 231 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 FEZ1Q99689 392 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 SPZ1Q9BXG8 430 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 TRAK2O60296 914 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 NLRP5P59047 1200 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 NPY5RQ15761 445 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 MAP1SQ66K74 1059 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-216ENST00000621396 RASGRP4Q8TDF6 673 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
CBWD3-216ENST00000621396 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 RIOX1Q9H6W3 641 aa18.35■□□□□ 0.53
CBWD3-216ENST00000621396 USP2O75604 605 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-216ENST00000621396 KRT85P78386 507 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 PITPNM2Q9BZ72 1349 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 TRIM75PA6NK02 468 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 PPP1R11O60927 126 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-216ENST00000621396 BMP3P12645 472 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 SPP2Q13103 211 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
CBWD3-216ENST00000621396 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 SEC63Q9UGP8 760 aaKnown RBP18.34■□□□□ 0.53
CBWD3-216ENST00000621396 CLIC4Q9Y696 253 aa18.34■□□□□ 0.53
CBWD3-216ENST00000621396 TRAF5O00463 557 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 XBP1P17861 261 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 MTMR2Q13614 643 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 SUPT20HL1Q3ZLR7 823 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 PPP4R3BQ5MIZ7 849 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 GPT2Q8TD30 523 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms