RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 DGKHQ86XP1 1220 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 GPRC5AQ8NFJ5 357 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 NCOA7Q8NI08 942 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 GMCL1Q96IK5 515 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 TRIM47Q96LD4 638 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 ZSCAN10Q96SZ4 725 aaPredicted RBP21.52■■□□□ 1.04
LITAF-220ENST00000620789 PEX10O60683 326 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 CNMDO75829 334 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 FMNL1O95466 1100 aaPredicted RBP21.51■■□□□ 1.03
LITAF-220ENST00000620789 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 ERVK-24P63145 666 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 CYB5R4Q7L1T6 521 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 FBXO28Q9NVF7 368 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 MGAMO43451 1857 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 TNKSO95271 1327 aa21.51■■□□□ 1.03
LITAF-220ENST00000620789 BMP3P12645 472 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 RNF20Q5VTR2 975 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 ANKS1AQ92625 1134 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 ATG4CQ96DT6 458 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 UBAC1Q9BSL1 405 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 BTBD7Q9P203 1132 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 PPP1R9AQ9ULJ8 1098 aa21.5■■□□□ 1.03
LITAF-220ENST00000620789 REC8O95072 547 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 MCCP23508 829 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 SLC1A4P43007 532 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 Q3C1V9 767 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 SAMD1Q6SPF0 538 aaPredicted RBP21.49■■□□□ 1.03
LITAF-220ENST00000620789 MB21D1Q8N884 522 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 ENAHQ8N8S7 591 aaPredicted RBP21.49■■□□□ 1.03
LITAF-220ENST00000620789 SLF1Q9BQI6 1058 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 ADAMTS5Q9UNA0 930 aa21.49■■□□□ 1.03
LITAF-220ENST00000620789 TNPO2O14787 897 aaKnown RBP21.48■■□□□ 1.03
LITAF-220ENST00000620789 FBXO46Q6PJ61 603 aaPredicted RBP21.48■■□□□ 1.03
LITAF-220ENST00000620789 RASGRP2Q7LDG7 609 aa21.48■■□□□ 1.03
LITAF-220ENST00000620789 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
LITAF-220ENST00000620789 DCAF4Q8WV16 495 aa21.48■■□□□ 1.03
LITAF-220ENST00000620789 FEM1BQ9UK73 627 aa21.48■■□□□ 1.03
LITAF-220ENST00000620789 MTMR7Q9Y216 660 aa21.48■■□□□ 1.03
LITAF-220ENST00000620789 PTPN22Q9Y2R2 807 aa21.48■■□□□ 1.03
LITAF-220ENST00000620789 HOXD10P28358 340 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 PRMT2P55345 433 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 CCNA1P78396 465 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 PRPF38AQ8NAV1 312 aaKnown RBP21.47■■□□□ 1.03
LITAF-220ENST00000620789 CHMP4CQ96CF2 233 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 KAT14Q9H8E8 782 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 SRRDQ9UH36 339 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 ISY1Q9ULR0 285 aaKnown RBP21.47■■□□□ 1.03
LITAF-220ENST00000620789 HTTP42858 3142 aa21.47■■□□□ 1.03
LITAF-220ENST00000620789 TMEM232C9JQI7 657 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 VWA5AO00534 786 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 MAPK4P31152 587 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 STAT2P52630 851 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 SEC23AQ15436 765 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 KCTD1Q719H9 257 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 PNMA1Q8ND90 353 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 COA7Q96BR5 231 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 PORCNQ9H237 461 aa21.46■■□□□ 1.03
LITAF-220ENST00000620789 EPB41L2O43491 1005 aaKnown RBP21.45■■□□□ 1.02
LITAF-220ENST00000620789 PLA2G6O60733 806 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 PDHBP11177 359 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 ZKSCAN1P17029 563 aaPredicted RBP21.45■■□□□ 1.02
LITAF-220ENST00000620789 ANTXR2P58335 489 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 SART3Q15020 963 aaKnown RBP21.45■■□□□ 1.02
LITAF-220ENST00000620789 CCDC96Q2M329 555 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 IFIT1BQ5T764 474 aaKnown RBP21.45■■□□□ 1.02
LITAF-220ENST00000620789 FAM160B2Q86V87 743 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 CCAR1Q8IX12 1150 aaKnown RBP21.45■■□□□ 1.02
LITAF-220ENST00000620789 CHURC1Q8WUH1 139 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 KIFC2Q96AC6 838 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 SPATC1LQ9H0A9 340 aa21.45■■□□□ 1.02
LITAF-220ENST00000620789 COL11A1P12107 1806 aaPredicted RBP21.45■■□□□ 1.02
LITAF-220ENST00000620789 ERICH2A1L162 156 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 IFIT3O14879 490 aaKnown RBP21.44■■□□□ 1.02
LITAF-220ENST00000620789 SNHG28P0DPA3 235 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 PRKCZQ05513 592 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 IKQ13123 557 aaPredicted RBP21.44■■□□□ 1.02
LITAF-220ENST00000620789 TMEM132BQ14DG7 1078 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 CHST3Q7LGC8 479 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 RASEFQ8IZ41 740 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 REPS2Q8NFH8 660 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 MOV10L1Q9BXT6 1211 aaKnown RBP21.44■■□□□ 1.02
LITAF-220ENST00000620789 PTCH2Q9Y6C5 1203 aa21.44■■□□□ 1.02
LITAF-220ENST00000620789 MCM5P33992 734 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 HSPA4P34932 840 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 PLS1Q14651 629 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 GPR142Q7Z601 462 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 KCNB2Q92953 911 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 ABHD8Q96I13 439 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 ZNF214Q9UL59 606 aaPredicted RBP21.43■■□□□ 1.02
LITAF-220ENST00000620789 GABRQQ9UN88 632 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
LITAF-220ENST00000620789 PRC1O43663 620 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 ZBED4O75132 1171 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 FDX1P10109 184 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 ZNF543Q08ER8 600 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 KRT32Q14532 448 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 WTAPQ15007 396 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 FRMPD2Q68DX3 1309 aaPredicted RBP21.42■■□□□ 1.02
LITAF-220ENST00000620789 PLEKHH3Q7Z736 793 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms