RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KRT9P35527 623 aa22.1■■□□□ 1.13
PDLIM3-212ENST00000620787 PAK1Q13153 545 aa22.1■■□□□ 1.13
PDLIM3-212ENST00000620787 CCDC102AQ96A19 550 aa22.1■■□□□ 1.13
PDLIM3-212ENST00000620787 MTRQ99707 1265 aa22.1■■□□□ 1.13
PDLIM3-212ENST00000620787 CARD10Q9BWT7 1032 aa22.1■■□□□ 1.13
PDLIM3-212ENST00000620787 KCNJ18B7U540 433 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 PLEKHA8P1O95397 391 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 PTGDRQ13258 359 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 KCNJ12Q14500 433 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 PIGBQ92521 554 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 CHP1Q99653 195 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 TRIM10Q9UDY6 481 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 DUOX1Q9NRD9 1551 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 SMIM22K7EJ46 135 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 TRAPPC11Q7Z392 1133 aa22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 ENAHQ8N8S7 591 aaPredicted RBP22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 V9GY48 417 aaPredicted RBP22.09■■□□□ 1.13
PDLIM3-212ENST00000620787 SLIT2O94813 1529 aa22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 GTPBP6O43824 516 aaPredicted RBP22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 HSP90B2PQ58FF3 399 aa22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 NELFBQ8WX92 580 aa22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 ESR2Q92731 530 aa22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 MED4Q9NPJ6 270 aa22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 EPN1Q9Y6I3 576 aaPredicted RBP22.08■■□□□ 1.13
PDLIM3-212ENST00000620787 BAZ2AQ9UIF9 1905 aaKnown RBP22.08■■□□□ 1.12
PDLIM3-212ENST00000620787 NDUFA10O95299 355 aa22.07■■□□□ 1.12
PDLIM3-212ENST00000620787 FOXR1Q6PIV2 292 aa22.07■■□□□ 1.12
PDLIM3-212ENST00000620787 ANAPC4Q9UJX5 808 aa22.07■■□□□ 1.12
PDLIM3-212ENST00000620787 MINDY4BA8MYZ0 360 aa22.07■■□□□ 1.12
PDLIM3-212ENST00000620787 PSMD14O00487 310 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 PHACTR2O75167 634 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 BCAMP50895 628 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 ANKRD20A12PQ8NF67 263 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 SDR42E1Q8WUS8 393 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 ACBD3Q9H3P7 528 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 BRMS1Q9HCU9 246 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 GUCA1BQ9UMX6 200 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 USP14P54578 494 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 IL17AQ16552 155 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 ZNF658Q5TYW1 1059 aaPredicted RBP22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 ADGRA1Q86SQ6 560 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 CCDC148Q8NFR7 591 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 ZSCAN10Q96SZ4 725 aaPredicted RBP22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 VIPAS39Q9H9C1 493 aa22.06■■□□□ 1.12
PDLIM3-212ENST00000620787 UBXN1Q04323 297 aa22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 AARSP49588 968 aaKnown RBP eCLIP22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 MAPK8IP2Q13387 824 aaPredicted RBP22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 IRF2BP1Q8IU81 584 aa22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 ZFP91Q96JP5 570 aaPredicted RBP22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 RBM28Q9NW13 759 aaKnown RBP22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 HDAC6Q9UBN7 1215 aa22.05■■□□□ 1.12
PDLIM3-212ENST00000620787 TTC26A0AVF1 554 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 FAM204AQ9H8W3 233 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 LRP2BPQ9P2M1 347 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 RSPH14Q9UHP6 348 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 GDAQ9Y2T3 454 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 CICQ96RK0 1608 aaPredicted RBP22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 SOS2Q07890 1332 aaPredicted RBP22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 CYP19A1P11511 503 aaPredicted RBP22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 CYP7A1P22680 504 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 HERVK_113P62684 666 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 TROAPQ12815 778 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 LRRC31Q6UY01 552 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 CATIPQ7Z7H3 387 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 DNAJC7Q99615 494 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 HAUS4Q9H6D7 363 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 ZBTB1Q9Y2K1 713 aa22.04■■□□□ 1.12
PDLIM3-212ENST00000620787 CNTNAP5Q8WYK1 1306 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 ENC1O14682 589 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 SYF2O95926 243 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 RPN1P04843 607 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 PRCPP42785 496 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 IFIT1BQ5T764 474 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 CADPS2Q86UW7 1296 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 OR8K1Q8NGG5 319 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 SLC4A9Q96Q91 983 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 PYM1Q9BRP8 204 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 RNF40O75150 1001 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 ATP1A1P05023 1023 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 PARP1P09874 1014 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 TMTC3Q6ZXV5 915 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 ZNF34Q8IZ26 560 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 MMS19Q96T76 1030 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 RMND1Q9NWS8 449 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 MKRN1Q9UHC7 482 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 MAPK8IP1Q9UQF2 711 aa22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 BAZ2BQ9UIF8 2168 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-212ENST00000620787 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
PDLIM3-212ENST00000620787 MB21D1Q8N884 522 aa22.02■■□□□ 1.12
PDLIM3-212ENST00000620787 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.12
PDLIM3-212ENST00000620787 PRPF6O94906 941 aaKnown RBP22.02■■□□□ 1.11
PDLIM3-212ENST00000620787 PAPD7Q5XG87 772 aaKnown RBP22.02■■□□□ 1.11
PDLIM3-212ENST00000620787 WDR59Q6PJI9 974 aa22.02■■□□□ 1.11
PDLIM3-212ENST00000620787 HPCAL4Q9UM19 191 aa22.02■■□□□ 1.11
PDLIM3-212ENST00000620787 LGALS16A8MUM7 142 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 H7C1D1 291 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 PIK3AP1Q6ZUJ8 805 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 CTCFLQ8NI51 663 aaPredicted RBP22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 TFR2Q9UP52 801 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 SAR1BQ9Y6B6 198 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms