RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 USP6NLQ92738 828 aa18.31■□□□□ 0.52
SRGAP2C-205ENST00000617209 TMEM106CQ9BVX2 250 aa18.31■□□□□ 0.52
SRGAP2C-205ENST00000617209 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
SRGAP2C-205ENST00000617209 HAND2P61296 217 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 MORN1Q5T089 497 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 FAM83BQ5T0W9 1011 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 SHCBP1Q8NEM2 672 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 ATG4CQ96DT6 458 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 SPATC1LQ9H0A9 340 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 IL25Q9H293 177 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
SRGAP2C-205ENST00000617209 UBXN2AP68543 259 aa18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 GMCL1Q96IK5 515 aa18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 TTC14Q96N46 770 aa18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 MOV10L1Q9BXT6 1211 aaKnown RBP18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 FBXO28Q9NVF7 368 aa18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
SRGAP2C-205ENST00000617209 SLC15A5A6NIM6 579 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 VWA5AO00534 786 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 SGSM2O43147 1006 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 STRNO43815 780 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 RAD21O60216 631 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 NEFLP07196 543 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 SLFN13Q68D06 897 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 TRMT44Q8IYL2 757 aaKnown RBP18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 ESR2Q92731 530 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 MROH8Q9H579 483 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 TOMM22Q9NS69 142 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 BIN2Q9UBW5 565 aaPredicted RBP18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
SRGAP2C-205ENST00000617209 POTEFA5A3E0 1075 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 NMT2O60551 498 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 BMP3P12645 472 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 ELNP15502 786 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 CAPN2P17655 700 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 PTPREP23469 700 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 TMEM132BQ14DG7 1078 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 BMP2KLQ5H9B9 411 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 RRP12Q5JTH9 1297 aaKnown RBP18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 TBC1D10CQ8IV04 446 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 LRRC47Q8N1G4 583 aaKnown RBP18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 REPS2Q8NFH8 660 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
SRGAP2C-205ENST00000617209 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.51
SRGAP2C-205ENST00000617209 ATP2A1O14983 1001 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 PLA2G6O60733 806 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 SLC25A27O95847 323 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 HOXC6P09630 235 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 FDX1P10109 184 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 RGS2P41220 211 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 MAP2K5Q13163 448 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 GRB14Q14449 540 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 MTFR1Q15390 333 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 ABRAQ8N0Z2 381 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 CWC22Q9HCG8 908 aaKnown RBP18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 ZNF214Q9UL59 606 aaPredicted RBP18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 IVNS1ABPQ9Y6Y0 642 aa18.26■□□□□ 0.51
SRGAP2C-205ENST00000617209 HMGCRP04035 888 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 INHAP05111 366 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 GJB1P08034 283 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 CCL5P13501 91 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 ERCC3P19447 782 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 CYP2B6P20813 491 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 STAT3P40763 770 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 CCDC178Q5BJE1 867 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 RCSD1Q6JBY9 416 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 RIOX2Q8IUF8 465 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 CHURC1Q8WUH1 139 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 CNNM2Q9H8M5 875 aa18.25■□□□□ 0.51
SRGAP2C-205ENST00000617209 ZNF236Q9UL36 1845 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 COPB2P35606 906 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 SLC1A4P43007 532 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 PLS1Q14651 629 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 FAM160B2Q86V87 743 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 DGKHQ86XP1 1220 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 TMEM47Q9BQJ4 181 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 RNF208Q9H0X6 261 aa18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
SRGAP2C-205ENST00000617209 NEDD4P46934 1319 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 ZBED4O75132 1171 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 EN2P19622 333 aaPredicted RBP18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 MCCP23508 829 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 STAT2P52630 851 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 OAZ1P54368 228 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 PTH1RQ03431 593 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 WDR78Q5VTH9 848 aa18.23■□□□□ 0.51
SRGAP2C-205ENST00000617209 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms