RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PRPF38AQ8NAV1 312 aaKnown RBP13.66□□□□□ -0.22
CCDC12-209ENST00000604164 APBA2Q99767 749 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 SPATC1LQ9H0A9 340 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 PORCNQ9H237 461 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 MROH8Q9H579 483 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
CCDC12-209ENST00000604164 GREB1LQ9C091 1923 aaPredicted RBP13.66□□□□□ -0.22
CCDC12-209ENST00000604164 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 GJB1P08034 283 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 FDX1P10109 184 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 GSPT1P15170 499 aaKnown RBP13.65□□□□□ -0.22
CCDC12-209ENST00000604164 ELNP15502 786 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 MAP2K5Q13163 448 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 PLS1Q14651 629 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 IMMTQ16891 758 aaKnown RBP13.65□□□□□ -0.22
CCDC12-209ENST00000604164 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 MORN1Q5T089 497 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
CCDC12-209ENST00000604164 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 ATG4CQ96DT6 458 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
CCDC12-209ENST00000604164 RBBP6Q7Z6E9 1792 aaKnown RBP13.64□□□□□ -0.23
CCDC12-209ENST00000604164 VWA5AO00534 786 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
CCDC12-209ENST00000604164 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
CCDC12-209ENST00000604164 CYP2B6P20813 491 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 PTPREP23469 700 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 RRP12Q5JTH9 1297 aaKnown RBP13.64□□□□□ -0.23
CCDC12-209ENST00000604164 SLFN13Q68D06 897 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 CHURC1Q8WUH1 139 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 ESR2Q92731 530 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 GMCL1Q96IK5 515 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 MOV10L1Q9BXT6 1211 aaKnown RBP13.64□□□□□ -0.23
CCDC12-209ENST00000604164 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
CCDC12-209ENST00000604164 PEX10O60683 326 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 ZBED4O75132 1171 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 BMP3P12645 472 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 ERCC3P19447 782 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
CCDC12-209ENST00000604164 SLC1A4P43007 532 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 GJA8P48165 433 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 HAND2P61296 217 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 GRB14Q14449 540 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 MTFR1Q15390 333 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 MFSD14CQ5VZR4 134 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 FAM160B2Q86V87 743 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 NCAPG2Q86XI2 1143 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
CCDC12-209ENST00000604164 USP6NLQ92738 828 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 TTC14Q96N46 770 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 CNNM2Q9H8M5 875 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
CCDC12-209ENST00000604164 ISY1Q9ULR0 285 aaKnown RBP13.63□□□□□ -0.23
CCDC12-209ENST00000604164 RPTORQ8N122 1335 aa13.63□□□□□ -0.23
CCDC12-209ENST00000604164 HTTP42858 3142 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 HOXC6P09630 235 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
CCDC12-209ENST00000604164 FCER1AP12319 257 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 CHMLP26374 656 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 STAT3P40763 770 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 STAT2P52630 851 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 IKQ13123 557 aaPredicted RBP13.62□□□□□ -0.23
CCDC12-209ENST00000604164 TMEM132BQ14DG7 1078 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 RCSD1Q6JBY9 416 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 DPP9Q86TI2 863 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 RIOX2Q8IUF8 465 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 NUP88Q99567 741 aaPredicted RBP13.62□□□□□ -0.23
CCDC12-209ENST00000604164 TEX13BQ9BXU2 312 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 KRT23Q9C075 422 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 FBXO28Q9NVF7 368 aa13.62□□□□□ -0.23
CCDC12-209ENST00000604164 ATP2A1O14983 1001 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 PLA2G6O60733 806 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 SGPL1O95470 568 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 NOVP48745 357 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 OAZ1P54368 228 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
CCDC12-209ENST00000604164 DCAF4Q8WV16 495 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 TRIB2Q92519 343 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 KIFC2Q96AC6 838 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 CCDC136Q96JN2 1154 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCDC12-209ENST00000604164 INCENPQ9NQS7 918 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 PAK6Q9NQU5 681 aaPredicted RBP13.61□□□□□ -0.23
CCDC12-209ENST00000604164 IL17RBQ9NRM6 502 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
CCDC12-209ENST00000604164 MYH4Q9Y623 1939 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 TMEM232C9JQI7 657 aa13.6□□□□□ -0.23
CCDC12-209ENST00000604164 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
CCDC12-209ENST00000604164 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
CCDC12-209ENST00000604164 MCCP23508 829 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms