RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 FANCBQ8NB91 859 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 A0A0D9SFI3 127 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 PPP1R21Q6ZMI0 780 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 FBXO18Q8NFZ0 1043 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 NUF2Q9BZD4 464 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 PRDM1O75626 825 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 LSG1Q9H089 658 aaKnown RBP23.24■■□□□ 1.31
SH3D19-211ENST00000604030 BLZF1Q9H2G9 400 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 POLR3EQ9NVU0 708 aa23.24■■□□□ 1.31
SH3D19-211ENST00000604030 EPN1Q9Y6I3 576 aaPredicted RBP23.24■■□□□ 1.31
SH3D19-211ENST00000604030 TBC1D31Q96DN5 1066 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 ZSCAN10Q96SZ4 725 aaPredicted RBP23.23■■□□□ 1.31
SH3D19-211ENST00000604030 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 HAUS2Q9NVX0 235 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 ERVV-2B6SEH9 535 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 HSPD1P10809 573 aaKnown RBP23.23■■□□□ 1.31
SH3D19-211ENST00000604030 TRAPPC3LQ5T215 181 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 TEKT1Q969V4 418 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 PPP1R12CQ9BZL4 782 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 MYOM2P54296 1465 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 KRIT1O00522 736 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 CRCPO75575 148 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 CHMP2AO43633 222 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 RIC8AQ9NPQ8 531 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 RNF14Q9UBS8 474 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
SH3D19-211ENST00000604030 SLC39A14Q15043 492 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 FANCLQ9NW38 375 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 ARMCX3Q9UH62 379 aaPredicted RBP23.22■■□□□ 1.31
SH3D19-211ENST00000604030 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 H0YCG3 227 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 HIP1RO75146 1068 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 SARNPP82979 210 aaKnown RBP23.22■■□□□ 1.31
SH3D19-211ENST00000604030 TFAP4Q01664 338 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 LRMPQ12912 555 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 SLFN12Q8IYM2 578 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 AATFQ9NY61 560 aaKnown RBP eCLIP23.22■■□□□ 1.31
SH3D19-211ENST00000604030 BAIAP2L1Q9UHR4 511 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 ZWINTO95229 277 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 OR52Z1P0C646 297 aa23.22■■□□□ 1.31
SH3D19-211ENST00000604030 EEF1GP26641 437 aaKnown RBP23.22■■□□□ 1.31
SH3D19-211ENST00000604030 CCDC117Q8IWD4 279 aaPredicted RBP23.22■■□□□ 1.31
SH3D19-211ENST00000604030 SMCO2A6NFE2 343 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 MYL1P05976 194 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 KCNA6P17658 529 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 EAF2Q96CJ1 260 aaPredicted RBP23.21■■□□□ 1.31
SH3D19-211ENST00000604030 COPRSQ9NQ92 184 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 PNMA2Q9UL42 364 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 CAPN7Q9Y6W3 813 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 GIPC1O14908 333 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 UBE3CQ15386 1083 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 CCDC89Q8N998 374 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 NLRC4Q9NPP4 1024 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 MAN1A1P33908 653 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 NELFCDQ8IXH7 590 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 BCAS4Q8TDM0 211 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 PPP1R13BQ96KQ4 1090 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 FOXP1Q9H334 677 aaPredicted RBP23.21■■□□□ 1.31
SH3D19-211ENST00000604030 H2AFZP0C0S5 128 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 H2AFVQ71UI9 128 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 IFNL3Q8IZI9 196 aa23.21■■□□□ 1.31
SH3D19-211ENST00000604030 LUC7L3O95232 432 aaKnown RBP23.2■■□□□ 1.31
SH3D19-211ENST00000604030 GAS2L3Q86XJ1 694 aa23.2■■□□□ 1.31
SH3D19-211ENST00000604030 U2AF1L4Q8WU68 220 aaKnown RBP23.2■■□□□ 1.31
SH3D19-211ENST00000604030 KCNK3O14649 394 aa23.2■■□□□ 1.3
SH3D19-211ENST00000604030 PPANQ9NQ55 473 aaKnown RBP23.2■■□□□ 1.3
SH3D19-211ENST00000604030 RPN1P04843 607 aaKnown RBP23.2■■□□□ 1.3
SH3D19-211ENST00000604030 ARMC9Q7Z3E5 817 aa23.2■■□□□ 1.3
SH3D19-211ENST00000604030 PSMB7Q99436 277 aa23.2■■□□□ 1.3
SH3D19-211ENST00000604030 FAN1Q9Y2M0 1017 aa23.2■■□□□ 1.3
SH3D19-211ENST00000604030 MYCNP04198 464 aaPredicted RBP23.2■■□□□ 1.3
SH3D19-211ENST00000604030 SCG2P13521 617 aa23.2■■□□□ 1.3
SH3D19-211ENST00000604030 PDIA3P30101 505 aaKnown RBP23.2■■□□□ 1.3
SH3D19-211ENST00000604030 SYNMO15061 1565 aa23.2■■□□□ 1.3
SH3D19-211ENST00000604030 P4HA1P13674 534 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 COPB1P53618 953 aaKnown RBP23.19■■□□□ 1.3
SH3D19-211ENST00000604030 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 CNGA1P29973 690 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 CEP120Q8N960 986 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 DESI2Q9BSY9 194 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 MIS12Q9H081 205 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 NDUFA8P51970 172 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 GEN1Q17RS7 908 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 NEK8Q86SG6 692 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 VPS37BQ9H9H4 285 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 TOM1O60784 492 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 SETSIPP0DME0 302 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 CCDC125Q86Z20 511 aa23.19■■□□□ 1.3
SH3D19-211ENST00000604030 DAPK3O43293 454 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 TACC3Q9Y6A5 838 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 RIMBP2O15034 1052 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 EVI5O60447 810 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 ZNF853P0CG23 659 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 RASA3Q14644 834 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 DHTKD1Q96HY7 919 aaPredicted RBP23.18■■□□□ 1.3
SH3D19-211ENST00000604030 CIAO1O76071 339 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms