RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 RBM27Q9P2N5 1060 aaKnown RBP24.5■■□□□ 1.51
GRAMD1A-214ENST00000603907 SLC45A1Q9Y2W3 748 aa24.5■■□□□ 1.51
GRAMD1A-214ENST00000603907 NR2E3Q9Y5X4 410 aa24.5■■□□□ 1.51
GRAMD1A-214ENST00000603907 PTPRFP10586 1907 aa24.5■■□□□ 1.51
GRAMD1A-214ENST00000603907 MB21D2Q8IYB1 491 aaPredicted RBP24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 SLAIN1Q8ND83 568 aa24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 UBAC1Q9BSL1 405 aa24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 VCPKMTQ9H867 229 aa24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 GOPCQ9HD26 462 aa24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 CLIP2Q9UDT6 1046 aa24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 STX8Q9UNK0 236 aa24.49■■□□□ 1.51
GRAMD1A-214ENST00000603907 HMGB1P09429 215 aaKnown RBP24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 PABPC4Q13310 644 aaKnown RBP eCLIP24.48■■□□□ 1.513e-9■■■□□ 15.8
GRAMD1A-214ENST00000603907 SART3Q15020 963 aaKnown RBP24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 GADL1Q6ZQY3 521 aa24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 ANKS1AQ92625 1134 aa24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 NEK1Q96PY6 1258 aa24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 ZSCAN10Q96SZ4 725 aaPredicted RBP24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 EMILIN3Q9NT22 766 aa24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 AGTPBP1Q9UPW5 1226 aa24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 SNX14Q9Y5W7 946 aa24.48■■□□□ 1.51
GRAMD1A-214ENST00000603907 NMT2O60551 498 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 PSMA5P28066 241 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 MCM5P33992 734 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 ANAPC15P60006 121 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 PRKCZQ05513 592 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 CYB5R4Q7L1T6 521 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 UBE2Q1Q7Z7E8 422 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 LOC285556D6RIA3 1793 aa24.47■■□□□ 1.51
GRAMD1A-214ENST00000603907 WDR19Q8NEZ3 1342 aa24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 ERICH2A1L162 156 aa24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 SEC24BO95487 1268 aa24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 BCRP11274 1271 aa24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 TOP1P11387 765 aaKnown RBP24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 GPAT2Q6NUI2 795 aa24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 GMCL1P1Q8NEA9 526 aa24.46■■□□□ 1.51
GRAMD1A-214ENST00000603907 TNKSO95271 1327 aa24.45■■□□□ 1.5
GRAMD1A-214ENST00000603907 FARP2O94887 1054 aaPredicted RBP24.45■■□□□ 1.5
GRAMD1A-214ENST00000603907 HOXA7P31268 230 aaPredicted RBP24.45■■□□□ 1.5
GRAMD1A-214ENST00000603907 RCSD1Q6JBY9 416 aa24.45■■□□□ 1.5
GRAMD1A-214ENST00000603907 U2AF1L4Q8WU68 220 aaKnown RBP24.45■■□□□ 1.5
GRAMD1A-214ENST00000603907 TMEM87BQ96K49 555 aa24.45■■□□□ 1.5
GRAMD1A-214ENST00000603907 WDR46O15213 610 aaKnown RBP24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 CYP2C8P10632 490 aa24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 VCAM1P19320 739 aa24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 ZYXQ15942 572 aaKnown RBP24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 ENAHQ8N8S7 591 aaPredicted RBP24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 ZKSCAN3Q9BRR0 538 aa24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 UPF2Q9HAU5 1272 aaKnown RBP24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 PNMA3Q9UL41 463 aa24.44■■□□□ 1.5
GRAMD1A-214ENST00000603907 F5H6K3 240 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 IFIT3O14879 490 aaKnown RBP24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 CAPN2P17655 700 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 KLRC3Q07444 240 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 ADCK5Q3MIX3 580 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 DHX32Q7L7V1 743 aaKnown RBP24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 IL17RAQ96F46 866 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 TMEM47Q9BQJ4 181 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 TM6SF1Q9BZW5 370 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 MYH4Q9Y623 1939 aa24.43■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L15C9J2P7 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L13C9JLJ4 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L11C9JVI0 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L18D6R9N7 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L22D6RA61 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L17D6RBQ6 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L19D6RCP7 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L20D6RJB6 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 PRC1O43663 620 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 ANTXR2P58335 489 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 USP17L24Q0WX57 530 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 SEC23AQ15436 765 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 TREML2Q5T2D2 321 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 IFIT1BQ5T764 474 aaKnown RBP24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 LRRC47Q8N1G4 583 aaKnown RBP24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 TMTC2Q8N394 836 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 JAKMIP1Q96N16 626 aaKnown RBP24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 UNC93B1Q9H1C4 597 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 GABRQQ9UN88 632 aa24.42■■□□□ 1.5
GRAMD1A-214ENST00000603907 ADCY3O60266 1144 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 SGPL1O95470 568 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 NDUFB10O96000 172 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 EXOSC10Q01780 885 aaKnown RBP24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 WTAPQ15007 396 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 BLOC1S2Q6QNY1 142 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 IGDCC4Q8TDY8 1250 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 GMCL1Q96IK5 515 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 KAT14Q9H8E8 782 aa24.41■■□□□ 1.5
GRAMD1A-214ENST00000603907 TMEM67Q5HYA8 995 aa24.4■■□□□ 1.5
GRAMD1A-214ENST00000603907 SLFN13Q68D06 897 aa24.4■■□□□ 1.5
GRAMD1A-214ENST00000603907 BACH2Q9BYV9 841 aa24.4■■□□□ 1.5
GRAMD1A-214ENST00000603907 PRO3102Q9H379 93 aa24.4■■□□□ 1.5
GRAMD1A-214ENST00000603907 LIFRP42702 1097 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 KIAA1755Q5JYT7 1200 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 CATSPERGQ6ZRH7 1159 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 CHST3Q7LGC8 479 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 PNMA1Q8ND90 353 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 PXYLP1Q8TE99 480 aa24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 SMCR8Q8TEV9 937 aaPredicted RBP24.39■■□□□ 1.49
GRAMD1A-214ENST00000603907 DCAF4Q8WV16 495 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms