RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 SPATC1LQ9H0A9 340 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 MROH8Q9H579 483 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 TCP11L1Q9NUJ3 509 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 CTNNA3Q9UI47 895 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 PARP14Q460N5 1801 aa28.12■■■□□ 2.09
SSX2IP-209ENST00000603677 SLC25A27O95847 323 aa28.11■■■□□ 2.09
SSX2IP-209ENST00000603677 CENPQQ7L2Z9 268 aaPredicted RBP28.11■■■□□ 2.09
SSX2IP-209ENST00000603677 PPP1R9AQ9ULJ8 1098 aa28.11■■■□□ 2.09
SSX2IP-209ENST00000603677 PLXNB2O15031 1838 aa28.11■■■□□ 2.09
SSX2IP-209ENST00000603677 POTEFA5A3E0 1075 aa28.1■■■□□ 2.09
SSX2IP-209ENST00000603677 PTPREP23469 700 aa28.1■■■□□ 2.09
SSX2IP-209ENST00000603677 CTDSPL2Q05D32 466 aa28.1■■■□□ 2.09
SSX2IP-209ENST00000603677 ABRAQ8N0Z2 381 aa28.1■■■□□ 2.09
SSX2IP-209ENST00000603677 PRPF38AQ8NAV1 312 aaKnown RBP28.1■■■□□ 2.09
SSX2IP-209ENST00000603677 ZNF213O14771 459 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 NDUFB10O96000 172 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 HOXC6P09630 235 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 CCL5P13501 91 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 GSPT1P15170 499 aaKnown RBP28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 GJA8P48165 433 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 MAP2K5Q13163 448 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 AKNAD1Q5T1N1 836 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 MFSD6Q6ZSS7 791 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 STAG1Q8WVM7 1258 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 APBA2Q99767 749 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 RNF208Q9H0X6 261 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 FEM1BQ9UK73 627 aa28.09■■■□□ 2.09
SSX2IP-209ENST00000603677 RANBP6O60518 1105 aaKnown RBP28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 INHAP05111 366 aa28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 FAM47AQ5JRC9 791 aa28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 FAM83BQ5T0W9 1011 aa28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 GMCL1Q96IK5 515 aa28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 TTC14Q96N46 770 aa28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 SLF1Q9BQI6 1058 aa28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 MOV10L1Q9BXT6 1211 aaKnown RBP28.08■■■□□ 2.09
SSX2IP-209ENST00000603677 VWA5AO00534 786 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 PLA2G6O60733 806 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 ELNP15502 786 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 GRB14Q14449 540 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 MTFR1Q15390 333 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 CCDC178Q5BJE1 867 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 ATG4CQ96DT6 458 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 SLC5A4Q9NY91 659 aa28.07■■■□□ 2.08
SSX2IP-209ENST00000603677 ATP2A1O14983 1001 aa28.06■■■□□ 2.08
SSX2IP-209ENST00000603677 RAD21O60216 631 aa28.06■■■□□ 2.08
SSX2IP-209ENST00000603677 PAK6Q9NQU5 681 aaPredicted RBP28.06■■■□□ 2.08
SSX2IP-209ENST00000603677 RPTORQ8N122 1335 aa28.06■■■□□ 2.08
SSX2IP-209ENST00000603677 ZNF236Q9UL36 1845 aa28.06■■■□□ 2.08
SSX2IP-209ENST00000603677 EN2P19622 333 aaPredicted RBP28.05■■■□□ 2.08
SSX2IP-209ENST00000603677 RIOX2Q8IUF8 465 aa28.05■■■□□ 2.08
SSX2IP-209ENST00000603677 IL17RBQ9NRM6 502 aa28.05■■■□□ 2.08
SSX2IP-209ENST00000603677 STX8Q9UNK0 236 aa28.05■■■□□ 2.08
SSX2IP-209ENST00000603677 PEX10O60683 326 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 BMP3P12645 472 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 CYP2B6P20813 491 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 OAZ1P54368 228 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 TMEM132BQ14DG7 1078 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 IMMTQ16891 758 aaKnown RBP28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 MAP3K21Q5TCX8 1036 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 SLFN13Q68D06 897 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 RCSD1Q6JBY9 416 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 FAM160B2Q86V87 743 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 CHURC1Q8WUH1 139 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 ESR2Q92731 530 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 HMX1Q9NP08 348 aaPredicted RBP28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 TOMM22Q9NS69 142 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 BRCA2P51587 3418 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 LAMA4Q16363 1823 aa28.04■■■□□ 2.08
SSX2IP-209ENST00000603677 SGPL1O95470 568 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 ZKSCAN1P17029 563 aaPredicted RBP28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 ERCC3P19447 782 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 CHMLP26374 656 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 STAT3P40763 770 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 WDR78Q5VTH9 848 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 TRIB2Q92519 343 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 PDE4DIPQ5VU43 2346 aa28.03■■■□□ 2.08
SSX2IP-209ENST00000603677 TEX13BQ9BXU2 312 aa28.02■■■□□ 2.08
SSX2IP-209ENST00000603677 UNC93B1Q9H1C4 597 aa28.02■■■□□ 2.08
SSX2IP-209ENST00000603677 FBXO28Q9NVF7 368 aa28.02■■■□□ 2.08
SSX2IP-209ENST00000603677 ZNF214Q9UL59 606 aaPredicted RBP28.02■■■□□ 2.08
SSX2IP-209ENST00000603677 ZBED4O75132 1171 aa28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 TOP1P11387 765 aaKnown RBP28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 STAT2P52630 851 aa28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 PLS1Q14651 629 aa28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 LRRC47Q8N1G4 583 aaKnown RBP28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 REPS2Q8NFH8 660 aa28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 U2AF1L4Q8WU68 220 aaKnown RBP28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 CNNM2Q9H8M5 875 aa28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 TACC3Q9Y6A5 838 aa28.01■■■□□ 2.07
SSX2IP-209ENST00000603677 FCER1AP12319 257 aa28■■■□□ 2.07
SSX2IP-209ENST00000603677 SLC1A4P43007 532 aa28■■■□□ 2.07
SSX2IP-209ENST00000603677 HAND2P61296 217 aa28■■■□□ 2.07
SSX2IP-209ENST00000603677 NCAPG2Q86XI2 1143 aa28■■■□□ 2.07
SSX2IP-209ENST00000603677 XRN2Q9H0D6 950 aaKnown RBP eCLIP28■■■□□ 2.07
SSX2IP-209ENST00000603677 INCENPQ9NQS7 918 aa28■■■□□ 2.07
SSX2IP-209ENST00000603677 CTDP1Q9Y5B0 961 aaPredicted RBP28■■■□□ 2.07
SSX2IP-209ENST00000603677 COL11A1P12107 1806 aaPredicted RBP27.99■■■□□ 2.07
SSX2IP-209ENST00000603677 TNRC18O15417 2968 aaPredicted RBP27.99■■■□□ 2.07
SSX2IP-209ENST00000603677 RRP12Q5JTH9 1297 aaKnown RBP27.99■■■□□ 2.07
SSX2IP-209ENST00000603677 MFSD14CQ5VZR4 134 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms