RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
SMG9-207ENST00000598860 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 CEP63Q96MT8 703 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 PSMD1Q99460 953 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
SMG9-207ENST00000598860 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 TOMM70O94826 608 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 CSF1RP07333 972 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
SMG9-207ENST00000598860 MX2P20592 715 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 FGFR3P22607 806 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.37
SMG9-207ENST00000598860 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.37
SMG9-207ENST00000598860 GRAPQ13588 217 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 LMBR1LQ6UX01 489 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 TREML1Q86YW5 311 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 GJD3Q8N144 294 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
SMG9-207ENST00000598860 EDEM1Q92611 657 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 JARID2Q92833 1246 aaPredicted RBP12.77□□□□□ -0.37
SMG9-207ENST00000598860 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
SMG9-207ENST00000598860 SRGAP3O43295 1099 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 WIPF1O43516 503 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 PDGFAP04085 211 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 BTLAQ7Z6A9 289 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 JDP2Q8WYK2 163 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 IGSF5Q9NSI5 407 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
SMG9-207ENST00000598860 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 DDNO94850 711 aaPredicted RBP12.75□□□□□ -0.37
SMG9-207ENST00000598860 TYRO3Q06418 890 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 EHHADHQ08426 723 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
SMG9-207ENST00000598860 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 HSP90AB4PQ58FF6 505 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 SUPT20HQ8NEM7 779 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
SMG9-207ENST00000598860 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 EFSO43281 561 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 USP5P45974 858 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 RPS8P62241 208 aaKnown RBP12.74□□□□□ -0.37
SMG9-207ENST00000598860 CTBSQ01459 385 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 PLCB3Q01970 1234 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 IER5Q5VY09 327 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 DPP8Q6V1X1 898 aaPredicted RBP12.74□□□□□ -0.37
SMG9-207ENST00000598860 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
SMG9-207ENST00000598860 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
SMG9-207ENST00000598860 GCC1Q96CN9 775 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 CDC5LQ99459 802 aaKnown RBP12.74□□□□□ -0.37
SMG9-207ENST00000598860 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
SMG9-207ENST00000598860 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 CD33P20138 364 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 VAMP1P23763 118 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 MAPK8P45983 427 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 SFSWAPQ12872 951 aaKnown RBP12.73□□□□□ -0.37
SMG9-207ENST00000598860 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 COPRSQ9NQ92 184 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 MARK1Q9P0L2 795 aa12.73□□□□□ -0.37
SMG9-207ENST00000598860 DMGDHQ9UI17 866 aaKnown RBP12.73□□□□□ -0.37
SMG9-207ENST00000598860 ARAP2Q8WZ64 1704 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 FZD9O00144 591 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 HSPA6P17066 643 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
SMG9-207ENST00000598860 EIF6P56537 245 aaKnown RBP12.72□□□□□ -0.37
SMG9-207ENST00000598860 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
SMG9-207ENST00000598860 RTFDC1Q9BY42 306 aaPredicted RBP12.72□□□□□ -0.37
SMG9-207ENST00000598860 GREM2Q9H772 168 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
SMG9-207ENST00000598860 NOP58Q9Y2X3 529 aaKnown RBP12.72□□□□□ -0.37
SMG9-207ENST00000598860 RAB11FIP3O75154 756 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.37
SMG9-207ENST00000598860 CIAO1O76071 339 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 MICAL2O94851 1124 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 BMP4P12644 408 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 IGHMBP2P38935 993 aaKnown RBP12.71□□□□□ -0.37
SMG9-207ENST00000598860 IDH3AP50213 366 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 SRSF11Q05519 484 aaKnown RBP12.71□□□□□ -0.37
SMG9-207ENST00000598860 FSTL1Q12841 308 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 SMC1BQ8NDV3 1235 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 NIF3L1Q9GZT8 377 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 SEC31BQ9NQW1 1179 aa12.71□□□□□ -0.37
SMG9-207ENST00000598860 NSFL1CQ9UNZ2 370 aaKnown RBP12.71□□□□□ -0.37
SMG9-207ENST00000598860 MYH13Q9UKX3 1938 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms