RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SCG2P13521 617 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 CDC25AP30304 524 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 NSUN4Q96CB9 384 aaKnown RBP18.65■□□□□ 0.58
LIG1-206ENST00000594067 N4BP3O15049 544 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 GYS2P54840 703 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 MECOMQ03112 1051 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 SLC20A2Q08357 652 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 GPS2Q13227 327 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 PDXDC2PQ6P474 469 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 ACRBPQ8NEB7 543 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
LIG1-206ENST00000594067 BAZ2BQ9UIF8 2168 aaKnown RBP18.64■□□□□ 0.57
LIG1-206ENST00000594067 KIF5CO60282 957 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 ZNF569Q5MCW4 686 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 CNGA4Q8IV77 575 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 DCP1AQ9NPI6 582 aaPredicted RBP18.64■□□□□ 0.57
LIG1-206ENST00000594067 TAB2Q9NYJ8 693 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 PUF60Q9UHX1 559 aaKnown RBP18.64■□□□□ 0.57
LIG1-206ENST00000594067 ADAM21Q9UKJ8 722 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 MAPK8IP1Q9UQF2 711 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 H3BQF6 201 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
LIG1-206ENST00000594067 BRD3Q15059 726 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 RASGRP2Q7LDG7 609 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 SRGAP1Q7Z6B7 1085 aa18.64■□□□□ 0.57
LIG1-206ENST00000594067 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 RNF225M0QZC1 329 aaPredicted RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 MARCH10Q8NA82 808 aaPredicted RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 TFCP2L1Q9NZI6 479 aa18.63■□□□□ 0.57
LIG1-206ENST00000594067 GTPBP6O43824 516 aaPredicted RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 ORC4O43929 436 aa18.63■□□□□ 0.57
LIG1-206ENST00000594067 ABL1P00519 1130 aa18.63■□□□□ 0.57
LIG1-206ENST00000594067 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
LIG1-206ENST00000594067 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 NELFBQ8WX92 580 aa18.63■□□□□ 0.57
LIG1-206ENST00000594067 LIMA1Q9UHB6 759 aaKnown RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 JAG2Q9Y219 1238 aa18.63■□□□□ 0.57
LIG1-206ENST00000594067 MYH14Q7Z406 1995 aaKnown RBP18.63■□□□□ 0.57
LIG1-206ENST00000594067 COPB1P53618 953 aaKnown RBP18.62■□□□□ 0.57
LIG1-206ENST00000594067 ERVK-24P63145 666 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 PAK1Q13153 545 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 CRNKL1Q9BZJ0 848 aaKnown RBP18.62■□□□□ 0.57
LIG1-206ENST00000594067 ANKZF1Q9H8Y5 726 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 PRDX5P30044 214 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 EXOC4Q96A65 974 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 RWDD2AQ9UIY3 292 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 GDAQ9Y2T3 454 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 TAF1P21675 1872 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 ITIH6Q6UXX5 1313 aa18.62■□□□□ 0.57
LIG1-206ENST00000594067 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 TRAPPC10P48553 1259 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 ZSCAN26Q16670 478 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 KIF4BQ2VIQ3 1234 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 SLC35F6Q8N357 371 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 RASGRP4Q8TDF6 673 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 HNRNPLLQ8WVV9 542 aaKnown RBP18.61■□□□□ 0.57
LIG1-206ENST00000594067 GPKOWQ92917 476 aaPredicted RBP eCLIP18.61■□□□□ 0.571e-9■■■■■ 32.6
LIG1-206ENST00000594067 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
LIG1-206ENST00000594067 PSD3Q9NYI0 1048 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 FEZ2Q9UHY8 353 aaPredicted RBP18.61■□□□□ 0.57
LIG1-206ENST00000594067 CDC23Q9UJX2 597 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
LIG1-206ENST00000594067 BEND6Q5SZJ8 279 aaPredicted RBP18.61■□□□□ 0.57
LIG1-206ENST00000594067 CCDC51Q96ER9 411 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 ABHD10Q9NUJ1 306 aa18.61■□□□□ 0.57
LIG1-206ENST00000594067 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 RPN1P04843 607 aaKnown RBP18.6■□□□□ 0.57
LIG1-206ENST00000594067 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 TCP11X2Q5H9J9 407 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 FAM205AQ6ZU69 1335 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 LRRC10BA6NIK2 292 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 KCNQ4P56696 695 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 ZNF658Q5TYW1 1059 aaPredicted RBP18.6■□□□□ 0.57
LIG1-206ENST00000594067 RCSD1Q6JBY9 416 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 RAB21Q9UL25 225 aa18.6■□□□□ 0.57
LIG1-206ENST00000594067 KCNQ2O43526 872 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 PRCPP42785 496 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 USP5P45974 858 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 TMTC1Q8IUR5 882 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 FECHP22830 423 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 BLIDQ8IZY5 108 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 CEP112Q8N8E3 955 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 C4orf32Q8N8J7 132 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 MSANTD4Q8NCY6 345 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 PNKPQ96T60 521 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 TSPYL1Q9H0U9 437 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 TTF2Q9UNY4 1162 aaKnown RBP18.59■□□□□ 0.57
LIG1-206ENST00000594067 LAMB2P55268 1798 aa18.59■□□□□ 0.57
LIG1-206ENST00000594067 CTAGE9A4FU28 777 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 TRIM49BA6NDI0 452 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 USP17L8P0C7I0 530 aa18.58■□□□□ 0.57
LIG1-206ENST00000594067 STAT6P42226 847 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms