RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 GUCY1A2P33402 732 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 DDIT3P35638 169 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 ERVK-24P63145 666 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 TRMT44Q8IYL2 757 aaKnown RBP12.09□□□□□ -0.47
APOC1-203ENST00000588802 SOCS4Q8WXH5 440 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
APOC1-203ENST00000588802 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
APOC1-203ENST00000588802 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
APOC1-203ENST00000588802 PAK6Q9NQU5 681 aaPredicted RBP12.09□□□□□ -0.47
APOC1-203ENST00000588802 NR2E3Q9Y5X4 410 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 DOCK3Q8IZD9 2030 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 MYH1P12882 1939 aa12.09□□□□□ -0.47
APOC1-203ENST00000588802 E7EWF7 191 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 CNMDO75829 334 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 FGAP02671 866 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 APPP05067 770 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 XRCC5P13010 732 aaKnown RBP12.08□□□□□ -0.48
APOC1-203ENST00000588802 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
APOC1-203ENST00000588802 VCAM1P19320 739 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 USP14P54578 494 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 CCL14Q16627 93 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
APOC1-203ENST00000588802 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 PLEKHH3Q7Z736 793 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 TBC1D10CQ8IV04 446 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 ANKLE1Q8NAG6 615 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 CHMP5Q9NZZ3 219 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 FOCADQ5VW36 1801 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
APOC1-203ENST00000588802 ZMYM6O95789 1325 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
APOC1-203ENST00000588802 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 EVI5O60447 810 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 MAPK4P31152 587 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 FXR1P51114 621 aaKnown RBP eCLIP12.07□□□□□ -0.48
APOC1-203ENST00000588802 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 GABPAQ06546 454 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 CUL4AQ13619 759 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
APOC1-203ENST00000588802 CATSPERGQ6ZRH7 1159 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 C12orf42Q96LP6 360 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 KIAA1683Q9H0B3 1180 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 NAPBQ9H115 298 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 BTBD7Q9P203 1132 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
APOC1-203ENST00000588802 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 SLC4A4Q9Y6R1 1079 aa12.07□□□□□ -0.48
APOC1-203ENST00000588802 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 AKR1B1P15121 316 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 CCND3P30281 292 aaPredicted RBP12.06□□□□□ -0.48
APOC1-203ENST00000588802 TDO2P48775 406 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 CACNB2Q08289 660 aaPredicted RBP12.06□□□□□ -0.48
APOC1-203ENST00000588802 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 NBR1Q14596 966 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 NECAB2Q7Z6G3 386 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 TANGO6Q9C0B7 1094 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 NEDD4P46934 1319 aa12.06□□□□□ -0.48
APOC1-203ENST00000588802 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
APOC1-203ENST00000588802 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
APOC1-203ENST00000588802 USP17L12C9JPN9 530 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 USP17L21D6R901 530 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 ZNF213O14771 459 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 RAD21O60216 631 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 GNAT2P19087 354 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 RGS2P41220 211 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 CCNA1P78396 465 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 ALX1Q15699 326 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 KIAA1755Q5JYT7 1200 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 MORN1Q5T089 497 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 Q6ZUG5 572 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
APOC1-203ENST00000588802 ZMYND8Q9ULU4 1186 aaPredicted RBP12.05□□□□□ -0.48
APOC1-203ENST00000588802 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
APOC1-203ENST00000588802 A0A1W2PPC1 479 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 CDK8P49336 464 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 PLS1Q14651 629 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 ME3Q16798 604 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 LBX2Q6XYB7 198 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 TMEM179Q6ZVK1 233 aa12.04□□□□□ -0.48
APOC1-203ENST00000588802 CHST3Q7LGC8 479 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms