RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 GREB1LQ9C091 1923 aaPredicted RBP11.93□□□□□ -0.5
TPM4-207ENST00000588032 CNMDO75829 334 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
TPM4-207ENST00000588032 FDX1P10109 184 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
TPM4-207ENST00000588032 GRK4P32298 578 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 PRKCZQ05513 592 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 FAM83BQ5T0W9 1011 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 SLFN13Q68D06 897 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 TBC1D10CQ8IV04 446 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 PRPF38AQ8NAV1 312 aaKnown RBP11.92□□□□□ -0.5
TPM4-207ENST00000588032 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 SHCBP1Q8NEM2 672 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 SOCS4Q8WXH5 440 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 NBPF3Q9H094 633 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 BTBD7Q9P203 1132 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 FEM1BQ9UK73 627 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 GJD2Q9UKL4 321 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
TPM4-207ENST00000588032 STRNO43815 780 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 ADCY3O60266 1144 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 NMT2O60551 498 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 BMP3P12645 472 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 SLC1A4P43007 532 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 PTH1RQ03431 593 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 TRDNQ13061 729 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 PLEKHH3Q7Z736 793 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 DGKHQ86XP1 1220 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
TPM4-207ENST00000588032 CHURC1Q8WUH1 139 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 ESYT1Q9BSJ8 1104 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 SPATC1LQ9H0A9 340 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 MROH8Q9H579 483 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
TPM4-207ENST00000588032 GABRQQ9UN88 632 aa11.91□□□□□ -0.5
TPM4-207ENST00000588032 VWA5AO00534 786 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 PLA2G6O60733 806 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 KDM4AO75164 1064 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 CDC45O75419 566 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 SLC25A27O95847 323 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
TPM4-207ENST00000588032 COPB2P35606 906 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 UBXN2AP68543 259 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 GPR142Q7Z601 462 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 TRMT44Q8IYL2 757 aaKnown RBP11.9□□□□□ -0.5
TPM4-207ENST00000588032 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 ZNF333Q96JL9 665 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 NUP88Q99567 741 aaPredicted RBP11.9□□□□□ -0.5
TPM4-207ENST00000588032 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 PORCNQ9H237 461 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 ZSWIM5Q9P217 1185 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 IVNS1ABPQ9Y6Y0 642 aa11.9□□□□□ -0.5
TPM4-207ENST00000588032 NEDD4P46934 1319 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 SLC15A5A6NIM6 579 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 B4E1Z4 1266 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 PEX10O60683 326 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 ZBED4O75132 1171 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 MCCP23508 829 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 RGS2P41220 211 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 RGS19P49795 217 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 STAT2P52630 851 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 PLS1Q14651 629 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 MORN1Q5T089 497 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 RIOX2Q8IUF8 465 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 ABRAQ8N0Z2 381 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
TPM4-207ENST00000588032 DCAF4Q8WV16 495 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
TPM4-207ENST00000588032 TMEM47Q9BQJ4 181 aa11.89□□□□□ -0.51
TPM4-207ENST00000588032 MOV10L1Q9BXT6 1211 aaKnown RBP11.89□□□□□ -0.51
TPM4-207ENST00000588032 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
TPM4-207ENST00000588032 CTDP1Q9Y5B0 961 aaPredicted RBP11.89□□□□□ -0.51
TPM4-207ENST00000588032 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 CYP21A2P08686 494 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 CAPN2P17655 700 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 ERCC3P19447 782 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 PTPREP23469 700 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 STAT3P40763 770 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 OAZ1P54368 228 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 WDR78Q5VTH9 848 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
TPM4-207ENST00000588032 NCOA7Q8NI08 942 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 SH3TC2Q8TF17 1288 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 USP6NLQ92738 828 aa11.88□□□□□ -0.51
TPM4-207ENST00000588032 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms