RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 BACE1P56817 501 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 PPATQ06203 517 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 SLC35G1Q2M3R5 365 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 KIAA1755Q5JYT7 1200 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 ERO1BQ86YB8 467 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 SMC1BQ8NDV3 1235 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 RBM46Q8TBY0 533 aaKnown RBP18.76■□□□□ 0.59
SS18-226ENST00000585241 LPAR1Q92633 364 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 ZHX2Q9Y6X8 837 aa18.76■□□□□ 0.59
SS18-226ENST00000585241 C19orf81C9J6K1 198 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 KLRF2D3W0D1 207 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 UBE2Q2LH0YL09 131 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 PLA2G6O60733 806 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 SLC1A4P43007 532 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 SPP2Q13103 211 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 SH3D19Q5HYK7 790 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 CST9Q5W186 159 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 BTNL9Q6UXG8 535 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 CLMNQ96JQ2 1002 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 FEZ1Q99689 392 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 RIOX1Q9H6W3 641 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 ZNF408Q9H9D4 720 aa18.75■□□□□ 0.59
SS18-226ENST00000585241 CIZ1Q9ULV3 898 aaPredicted RBP18.75■□□□□ 0.59
SS18-226ENST00000585241 PTPRFP10586 1907 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 WDR46O15213 610 aaKnown RBP18.74■□□□□ 0.59
SS18-226ENST00000585241 PRPF3O43395 683 aaKnown RBP18.74■□□□□ 0.59
SS18-226ENST00000585241 CYTH3O43739 400 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 GOLGA8HP0CJ92 632 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 BMP3P12645 472 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 PPIL2Q13356 520 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 MTMR2Q13614 643 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 C2orf69Q8N8R5 385 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 PHKBQ93100 1093 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 ELP3Q9H9T3 547 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 RBM27Q9P2N5 1060 aaKnown RBP18.74■□□□□ 0.59
SS18-226ENST00000585241 ORC3Q9UBD5 711 aaPredicted RBP18.74■□□□□ 0.59
SS18-226ENST00000585241 KCNH4Q9UQ05 1017 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 MTMR7Q9Y216 660 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 KIF3AQ9Y496 699 aa18.74■□□□□ 0.59
SS18-226ENST00000585241 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
SS18-226ENST00000585241 TOMM70O94826 608 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 DEXIO95424 95 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 YY1P25490 414 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 SSRP1Q08945 709 aaKnown RBP18.73■□□□□ 0.59
SS18-226ENST00000585241 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 TRIM22Q8IYM9 498 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 CMTR1Q8N1G2 835 aaKnown RBP18.73■□□□□ 0.59
SS18-226ENST00000585241 DDX11Q96FC9 970 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 EMILIN3Q9NT22 766 aa18.73■□□□□ 0.59
SS18-226ENST00000585241 CXCL11O14625 94 aa18.72■□□□□ 0.59
SS18-226ENST00000585241 PDIA4P13667 645 aaKnown RBP18.72■□□□□ 0.59
SS18-226ENST00000585241 KCTD1Q719H9 257 aa18.72■□□□□ 0.59
SS18-226ENST00000585241 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
SS18-226ENST00000585241 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
SS18-226ENST00000585241 SLC26A6Q9BXS9 759 aa18.72■□□□□ 0.59
SS18-226ENST00000585241 LOC285556D6RIA3 1793 aa18.72■□□□□ 0.59
SS18-226ENST00000585241 TRIM75PA6NK02 468 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 DTNBO60941 627 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 PDCP20941 246 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 ZYXQ15942 572 aaKnown RBP18.71■□□□□ 0.59
SS18-226ENST00000585241 PKN1Q16512 942 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 FAM83BQ5T0W9 1011 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 SPICE1Q8N0Z3 855 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 FAM184AQ8NB25 1140 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 ZNF784Q8NCA9 323 aaPredicted RBP18.71■□□□□ 0.59
SS18-226ENST00000585241 WASF1Q92558 559 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 NUP88Q99567 741 aaPredicted RBP18.71■□□□□ 0.59
SS18-226ENST00000585241 GPCPD1Q9NPB8 672 aa18.71■□□□□ 0.59
SS18-226ENST00000585241 MYH6P13533 1939 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 A0A0G2JLL6 359 aaPredicted RBP18.7■□□□□ 0.58
SS18-226ENST00000585241 IRF6O14896 467 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 RAD21O60216 631 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 VCAM1P19320 739 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 SYT1P21579 422 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 FSTL1Q12841 308 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 PRRT2Q7Z6L0 340 aaPredicted RBP18.7■□□□□ 0.58
SS18-226ENST00000585241 FAM160B2Q86V87 743 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 OPTNQ96CV9 577 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 OTUD5Q96G74 571 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 UBA5Q9GZZ9 404 aa18.7■□□□□ 0.58
SS18-226ENST00000585241 BAZ2BQ9UIF8 2168 aaKnown RBP18.7■□□□□ 0.58
SS18-226ENST00000585241 V9GY48 417 aaPredicted RBP18.7■□□□□ 0.58
SS18-226ENST00000585241 TMEM232C9JQI7 657 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 PPFIA3O75145 1194 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 GJA5P36382 358 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 STAT2P52630 851 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 HMGCS2P54868 508 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 AKAP17AQ02040 695 aaKnown RBP18.69■□□□□ 0.58
SS18-226ENST00000585241 PFKFB3Q16875 520 aaPredicted RBP18.69■□□□□ 0.58
SS18-226ENST00000585241 SYDE2Q5VT97 1194 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 ADGRF4Q8IZF3 695 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 FAM177A1Q8N128 213 aaPredicted RBP18.69■□□□□ 0.58
SS18-226ENST00000585241 SLC10A4Q96EP9 437 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 JMJD4Q9H9V9 463 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 CHMP5Q9NZZ3 219 aa18.69■□□□□ 0.58
SS18-226ENST00000585241 FEM1BQ9UK73 627 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms