RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 AS3MTQ9HBK9 375 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
SENP3-208ENST00000583277 FRMPD2Q68DX3 1309 aaPredicted RBP16.95■□□□□ 0.3
SENP3-208ENST00000583277 PHIPQ8WWQ0 1821 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 RAD21O60216 631 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 IREB2P48200 963 aaKnown RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 CLEC17AQ6ZS10 378 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 RRAGCQ9HB90 399 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 MYH15Q9Y2K3 1946 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 ECE1P42892 770 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 FOSBP53539 338 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 PFKFB3Q16875 520 aaPredicted RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 KIAA1683Q9H0B3 1180 aa16.94■□□□□ 0.3
SENP3-208ENST00000583277 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
SENP3-208ENST00000583277 CYTH3O43739 400 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 BMP3P12645 472 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 SCG2P13521 617 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 PKN1Q16512 942 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
SENP3-208ENST00000583277 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
SENP3-208ENST00000583277 LPAR1Q92633 364 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
SENP3-208ENST00000583277 AIFM3Q96NN9 605 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 RIOX1Q9H6W3 641 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 GPCPD1Q9NPB8 672 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.93■□□□□ 0.3
SENP3-208ENST00000583277 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
SENP3-208ENST00000583277 CSADQ9Y600 493 aa16.93■□□□□ 0.3
SENP3-208ENST00000583277 PTPRAP18433 802 aa16.92■□□□□ 0.3
SENP3-208ENST00000583277 USP14P54578 494 aa16.92■□□□□ 0.3
SENP3-208ENST00000583277 KRT40Q6A162 431 aa16.92■□□□□ 0.3
SENP3-208ENST00000583277 KCTD1Q719H9 257 aa16.92■□□□□ 0.3
SENP3-208ENST00000583277 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 GUCY1B3Q02153 619 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
SENP3-208ENST00000583277 MAP3K11Q16584 847 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 SLC35G1Q2M3R5 365 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
SENP3-208ENST00000583277 ZNF280CQ8ND82 737 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 SH3GLB2Q9NR46 395 aa16.91■□□□□ 0.3
SENP3-208ENST00000583277 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 RESTQ13127 1097 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 PRKG1Q13976 671 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 VGLL4Q14135 290 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 ARMC9Q7Z3E5 817 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 CCDC84Q86UT8 332 aaPredicted RBP16.9■□□□□ 0.3
SENP3-208ENST00000583277 ANKRD13AQ8IZ07 590 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 TCHHQ07283 1943 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 PTPRFP10586 1907 aa16.9■□□□□ 0.3
SENP3-208ENST00000583277 hCG_1642624A0A1W2PR95 340 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.3
SENP3-208ENST00000583277 PLA2G6O60733 806 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 BAG4O95429 457 aaKnown RBP16.89■□□□□ 0.3
SENP3-208ENST00000583277 MMP1P03956 469 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 STAT2P52630 851 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.3
SENP3-208ENST00000583277 MAP1SQ66K74 1059 aaPredicted RBP16.89■□□□□ 0.3
SENP3-208ENST00000583277 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 DLK2Q6UY11 383 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.3
SENP3-208ENST00000583277 BRAPQ7Z569 592 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 FERMT3Q86UX7 667 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 ADGRF4Q8IZF3 695 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 CCDC148Q8NFR7 591 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.3
SENP3-208ENST00000583277 CPVLQ9H3G5 476 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.3
SENP3-208ENST00000583277 UNCXA6NJT0 531 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 BACE1P56817 501 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
SENP3-208ENST00000583277 MTMR2Q13614 643 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.29
SENP3-208ENST00000583277 OTUD7BQ6GQQ9 843 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 CHURC1Q8WUH1 139 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 PIBF1Q8WXW3 757 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 MTMR8Q96EF0 704 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 NUP88Q99567 741 aaPredicted RBP16.89■□□□□ 0.29
SENP3-208ENST00000583277 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
SENP3-208ENST00000583277 VPS54Q9P1Q0 977 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms