RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 KIF5BP33176 963 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MAP3K10Q02779 954 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TNFAIP1Q13829 316 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 FAM83BQ5T0W9 1011 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SAMD1Q6SPF0 538 aaPredicted RBP7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 HEATR3Q7Z4Q2 680 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 APOBEC3FQ8IUX4 373 aaKnown RBP7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DIS3L2Q8IYB7 885 aaKnown RBP7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TRIM22Q8IYM9 498 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GPT2Q8TD30 523 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 WRNIP1Q96S55 665 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ZNF341Q9BYN7 854 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TAF1DQ9H5J8 278 aaPredicted RBP7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 JMJD4Q9H9V9 463 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CLIC4Q9Y696 253 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SIPA1L1O43166 1804 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DDX11L8A8MPP1 907 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 F5H6K3 240 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TRAK2O60296 914 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MMP1P03956 469 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 AKAP17AQ02040 695 aaKnown RBP7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KLRC3Q07444 240 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PFKFB3Q16875 520 aaPredicted RBP7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MYSM1Q5VVJ2 828 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KRT26Q7Z3Y9 468 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ADGRF4Q8IZF3 695 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ZNF526Q8TF50 670 aaPredicted RBP7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LEO1Q8WVC0 666 aaPredicted RBP7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TNFRSF25Q93038 417 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MKL1Q969V6 931 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 COA7Q96BR5 231 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PGBD1Q96JS3 809 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MAP3K14Q99558 947 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PHF20Q9BVI0 1012 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SPZ1Q9BXG8 430 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KIF3AQ9Y496 699 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MRVI1Q9Y6F6 885 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 BAZ2AQ9UIF9 1905 aaKnown RBP7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MYH2Q9UKX2 1941 aa7.11□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LAMB1P07942 1786 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TMEM232C9JQI7 657 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 USP2O75604 605 aaPredicted RBP7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SLC1A4P43007 532 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NT5C2P49902 561 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GNAQP50148 359 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MMP14P50281 582 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TOB1P50616 345 aaPredicted RBP7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NLRP5P59047 1200 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MTMR2Q13614 643 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TRIM29Q14134 588 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 QRICH1Q2TAL8 776 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ASPRV1Q53RT3 343 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SYDE2Q5VT97 1194 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MAP1SQ66K74 1059 aaPredicted RBP7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DPY19L2Q6NUT2 758 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TMEM87AQ8NBN3 555 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GMCL1P1Q8NEA9 526 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DCAF4Q8WV16 495 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 WASF1Q92558 559 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DCPSQ96C86 337 aaKnown RBP7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CDCA5Q96FF9 252 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CLMNQ96JQ2 1002 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RIOX1Q9H6W3 641 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NMRK2Q9NPI5 230 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TMEM260Q9NX78 707 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ZNF112Q9UJU3 913 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TMX2Q9Y320 296 aa7.1□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TRIM75PA6NK02 468 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CTNND1O60716 968 aaKnown RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 BMP3P12645 472 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PTPRAP18433 802 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LIG1P18858 919 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 U2AF2P26368 475 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KRT2P35908 639 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NAPAP54920 295 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KRT85P78386 507 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GRIN1Q05586 938 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SPP2Q13103 211 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 IKQ13123 557 aaPredicted RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GNL2Q13823 731 aaKnown RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 VGLL4Q14135 290 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PPP2R5BQ15173 497 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CDC37Q16543 378 aaPredicted RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 UBE2SQ16763 222 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DCAF15Q66K64 600 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CCDC174Q6PII3 467 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NOSTRINQ8IVI9 506 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SULF1Q8IWU6 871 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SCYL3Q8IZE3 742 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KLRG1Q96E93 195 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MTMR8Q96EF0 704 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RRP36Q96EU6 259 aaKnown RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms