RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CCDC85BQ15834 202 aaPredicted RBP6.05□□□□□ -1.44
SMG8-205ENST00000580798 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 FAM129CQ86XR2 697 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 CRTAC1Q9NQ79 661 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
SMG8-205ENST00000580798 NRDCO43847 1150 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 INSRRP14616 1297 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 YBX1P67809 324 aaKnown RBP6.04□□□□□ -1.44
SMG8-205ENST00000580798 RPL6Q02878 288 aaKnown RBP6.04□□□□□ -1.44
SMG8-205ENST00000580798 PLP2Q04941 152 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 FRMD5Q7Z6J6 570 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 FAM13CQ8NE31 585 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 MZB1Q8WU39 189 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 BDH2Q9BUT1 245 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 MIR1-1HGQ9H1L0 117 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 RNF19AQ9NV58 838 aa6.04□□□□□ -1.44
SMG8-205ENST00000580798 CILPO75339 1184 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 PRPF40AO75400 957 aaKnown RBP6.03□□□□□ -1.44
SMG8-205ENST00000580798 HSP90B1P14625 803 aaKnown RBP6.03□□□□□ -1.44
SMG8-205ENST00000580798 RPL10P27635 214 aaKnown RBP6.03□□□□□ -1.44
SMG8-205ENST00000580798 LIG3P49916 1009 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 SLC14A2Q15849 920 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 TSNAXIP1Q2TAA8 658 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 CEP128Q6ZU80 1094 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 LINC01356Q8N9X3 169 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 TP53I13Q8NBR0 393 aaPredicted RBP6.03□□□□□ -1.44
SMG8-205ENST00000580798 KREMEN1Q96MU8 473 aa6.03□□□□□ -1.44
SMG8-205ENST00000580798 SHROOM4Q9ULL8 1493 aa6.02□□□□□ -1.44
SMG8-205ENST00000580798 PLCG1P19174 1290 aa6.02□□□□□ -1.45
SMG8-205ENST00000580798 TFE3P19532 575 aaPredicted RBP6.02□□□□□ -1.45
SMG8-205ENST00000580798 KIR2DL1P43626 348 aaPredicted RBP6.02□□□□□ -1.45
SMG8-205ENST00000580798 KIR2DL2P43627 348 aaPredicted RBP6.02□□□□□ -1.45
SMG8-205ENST00000580798 YARSP54577 528 aaKnown RBP6.02□□□□□ -1.45
SMG8-205ENST00000580798 PUM1Q14671 1186 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMG8-205ENST00000580798 MAP3K11Q16584 847 aa6.02□□□□□ -1.45
SMG8-205ENST00000580798 CLEC16AQ2KHT3 1053 aa6.02□□□□□ -1.45
SMG8-205ENST00000580798 IGDCC3Q8IVU1 814 aa6.02□□□□□ -1.45
SMG8-205ENST00000580798 MAP6Q96JE9 813 aa6.02□□□□□ -1.45
SMG8-205ENST00000580798 ZMYM5Q9UJ78 669 aa6.02□□□□□ -1.45
SMG8-205ENST00000580798 PNLIPP16233 465 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 RNF111Q6ZNA4 994 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 WAPLQ7Z5K2 1190 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 USHBP1Q8N6Y0 703 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 JARID2Q92833 1246 aaPredicted RBP6.01□□□□□ -1.45
SMG8-205ENST00000580798 HHIPL1Q96JK4 782 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 PWWP2AQ96N64 755 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 DUSP9Q99956 384 aaKnown RBP6.01□□□□□ -1.45
SMG8-205ENST00000580798 PLCD4Q9BRC7 762 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 ASPNQ9BXN1 380 aa6.01□□□□□ -1.45
SMG8-205ENST00000580798 ZBTB7CA1YPR0 619 aa6□□□□□ -1.45
SMG8-205ENST00000580798 PRICKLE3O43900 615 aaPredicted RBP6□□□□□ -1.45
SMG8-205ENST00000580798 TNNI2P48788 182 aa6□□□□□ -1.45
SMG8-205ENST00000580798 ERVFRD-1P60508 538 aa6□□□□□ -1.45
SMG8-205ENST00000580798 RTP5Q14D33 572 aa6□□□□□ -1.45
SMG8-205ENST00000580798 TMEM201Q5SNT2 666 aa6□□□□□ -1.45
SMG8-205ENST00000580798 OLFML2BQ68BL8 750 aa6□□□□□ -1.45
SMG8-205ENST00000580798 LDHDQ86WU2 507 aa6□□□□□ -1.45
SMG8-205ENST00000580798 SLFN12Q8IYM2 578 aa6□□□□□ -1.45
SMG8-205ENST00000580798 TRAIPQ9BWF2 469 aa6□□□□□ -1.45
SMG8-205ENST00000580798 HDAC8Q9BY41 377 aa6□□□□□ -1.45
SMG8-205ENST00000580798 FOXP3Q9BZS1 431 aa6□□□□□ -1.45
SMG8-205ENST00000580798 KLHL14Q9P2G3 628 aa6□□□□□ -1.45
SMG8-205ENST00000580798 AK5Q9Y6K8 562 aa6□□□□□ -1.45
SMG8-205ENST00000580798 TMEM82A0PJX8 343 aa5.99□□□□□ -1.45
SMG8-205ENST00000580798 ABLIM1O14639 778 aa5.99□□□□□ -1.45
SMG8-205ENST00000580798 MEI1Q5TIA1 1274 aa5.99□□□□□ -1.45
SMG8-205ENST00000580798 HHIPL2Q6UWX4 724 aa5.99□□□□□ -1.45
SMG8-205ENST00000580798 SYTL5Q8TDW5 730 aaPredicted RBP5.99□□□□□ -1.45
SMG8-205ENST00000580798 VWCEQ96DN2 955 aa5.99□□□□□ -1.45
SMG8-205ENST00000580798 MYRFQ9Y2G1 1151 aa5.99□□□□□ -1.45
SMG8-205ENST00000580798 ANKRD33BA6NCL7 494 aa5.98□□□□□ -1.45
SMG8-205ENST00000580798 PDIA4P13667 645 aaKnown RBP5.98□□□□□ -1.45
SMG8-205ENST00000580798 NMIQ13287 307 aaPredicted RBP5.98□□□□□ -1.45
SMG8-205ENST00000580798 KIR3DS1Q14943 382 aa5.98□□□□□ -1.45
SMG8-205ENST00000580798 TMC6Q7Z403 805 aa5.98□□□□□ -1.45
SMG8-205ENST00000580798 ENOX1Q8TC92 643 aaKnown RBP5.98□□□□□ -1.45
SMG8-205ENST00000580798 PCDHA5Q9Y5H7 936 aa5.98□□□□□ -1.45
SMG8-205ENST00000580798 CHURC1-FNTBB4DL54 471 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 FFAR3O14843 346 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 RTP1P59025 263 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 EAPPQ56P03 285 aaPredicted RBP5.97□□□□□ -1.45
SMG8-205ENST00000580798 ZPBP2Q6X784 338 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 TCTN2Q96GX1 697 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 CCDC74BQ96LY2 380 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 GPR20Q99678 358 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 ASCC2Q9H1I8 757 aaPredicted RBP5.97□□□□□ -1.45
SMG8-205ENST00000580798 TCFL5Q9UL49 500 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 TLR6Q9Y2C9 796 aa5.97□□□□□ -1.45
SMG8-205ENST00000580798 PATL2C9JE40 543 aaKnown RBP5.96□□□□□ -1.46
SMG8-205ENST00000580798 BUB1BO60566 1050 aaPredicted RBP5.96□□□□□ -1.46
SMG8-205ENST00000580798 MPOP05164 745 aa5.96□□□□□ -1.46
SMG8-205ENST00000580798 KCNC1P48547 511 aa5.96□□□□□ -1.46
SMG8-205ENST00000580798 NCKAP1LP55160 1127 aa5.96□□□□□ -1.46
SMG8-205ENST00000580798 DAGLBQ8NCG7 672 aa5.96□□□□□ -1.46
SMG8-205ENST00000580798 LOC105371045A0A1W2PR82 267 aa5.95□□□□□ -1.46
SMG8-205ENST00000580798 AKAP8O43823 692 aaKnown RBP5.95□□□□□ -1.46
SMG8-205ENST00000580798 SLURP1P55000 103 aa5.95□□□□□ -1.46
SMG8-205ENST00000580798 PCBP3P57721 371 aaKnown RBP5.95□□□□□ -1.46
SMG8-205ENST00000580798 BBS9Q3SYG4 887 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms