RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 ZNF227Q86WZ6 799 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 FAM20CQ8IXL6 584 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 CRACR2BQ8N4Y2 399 aaPredicted RBP8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 BVESQ8NE79 360 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 DHRS4Q9BTZ2 278 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 GP6Q9HCN6 339 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 SUGT1Q9Y2Z0 365 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 PCDHB12Q9Y5F1 795 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 CD2APQ9Y5K6 639 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 COL4A3BPQ9Y5P4 624 aa8.92□□□□□ -0.98
TOM1L1-222ENST00000575909 MASP1P48740 699 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 NBPF9Q3BBW0 867 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 DALRD3Q5D0E6 543 aaKnown RBP8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 POMZP3Q6PJE2 187 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 PAOXQ6QHF9 649 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 TXNRD3Q86VQ6 643 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 SCUBE1Q8IWY4 988 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 ARMC10Q8N2F6 343 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 KISS1RQ969F8 398 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 PRR13Q9NZ81 148 aa8.91□□□□□ -0.98
TOM1L1-222ENST00000575909 RFPL3O75679 317 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 FGFR1P11362 822 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 ANAPC15P60006 121 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 CDK5R2Q13319 367 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 FOXB2Q5VYV0 432 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 ARHGEF39Q8N4T4 335 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 MEGF10Q96KG7 1140 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 EXOC2Q96KP1 924 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 PCDH12Q9NPG4 1184 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 FBXL21Q9UKT6 434 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 TPX2Q9ULW0 747 aaKnown RBP8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 EMC9Q9Y3B6 208 aa8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 MRPS23Q9Y3D9 190 aaKnown RBP8.9□□□□□ -0.98
TOM1L1-222ENST00000575909 TRBV23-1A0A0A0MS06 115 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 CAPNS1P04632 268 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 L1CAMP32004 1257 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 NFKBIBQ15653 356 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 FAM209AQ5JX71 171 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 NOL9Q5SY16 702 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 TOP6BLQ8N6T0 577 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 NINJ1Q92982 152 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 MRGPRX3Q96LB0 322 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 DUSP23Q9BVJ7 150 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 KCNF1Q9H3M0 494 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 NCOA5Q9HCD5 579 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 AKT3Q9Y243 479 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 FHOD1Q9Y613 1164 aa8.89□□□□□ -0.99
TOM1L1-222ENST00000575909 PLD2O14939 933 aa8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 DHX15O43143 795 aaKnown RBP8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 EOMESO95936 686 aa8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 ZNF445P59923 1031 aa8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 YOD1Q5VVQ6 348 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 TRIM59Q8IWR1 403 aa8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 SYTL5Q8TDW5 730 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
TOM1L1-222ENST00000575909 DNAJC25-GNG10A0A024R161 153 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 VIL1P09327 827 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 PABPC1P11940 636 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 FNDC3BQ53EP0 1204 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 NSMFQ6X4W1 530 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 BEND4Q6ZU67 534 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 CLEC10AQ8IUN9 316 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 NIM1KQ8IY84 436 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 ADCY4Q8NFM4 1077 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 MFSD3Q96ES6 412 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 PRDM14Q9GZV8 571 aa8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 CGGBP1Q9UFW8 167 aaPredicted RBP8.87□□□□□ -0.99
TOM1L1-222ENST00000575909 PRODHO43272 600 aa8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 INSM1Q01101 510 aaPredicted RBP8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 PABPC4Q13310 644 aaKnown RBP eCLIP8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 FAM83CQ9BQN1 747 aa8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 LGR4Q9BXB1 951 aa8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 MRPL4Q9BYD3 311 aaKnown RBP8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 PRDM5Q9NQX1 630 aaPredicted RBP8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 KCNH3Q9ULD8 1083 aa8.86□□□□□ -0.99
TOM1L1-222ENST00000575909 TBX1O43435 398 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 GRIA2P42262 883 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 KIR3DL1P43629 444 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 GRB10Q13322 594 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 CBX2Q14781 532 aaPredicted RBP8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 C21orf62-AS1Q17RA5 79 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 TM4SF20Q53R12 229 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 SFRP5Q5T4F7 317 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 KRT26Q7Z3Y9 468 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 OSBP2Q969R2 916 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 SF3B6Q9Y3B4 125 aaKnown RBP8.85□□□□□ -0.99
TOM1L1-222ENST00000575909 LRRN2O75325 713 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 LEFTY1O75610 366 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 GPAT2Q6NUI2 795 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 C22orf34Q6ZV56 151 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 FIBCD1Q8N539 461 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 BRF1Q92994 677 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 IER2Q9BTL4 223 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 NOL6Q9H6R4 1146 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 GTF2IRD1Q9UHL9 959 aa8.84□□□□□ -0.99
TOM1L1-222ENST00000575909 SIGLEC6O43699 453 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms