RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NUTM1Q86Y26 1132 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 NLGN2Q8NFZ4 835 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 DPF3Q92784 378 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 PPP2R3CQ969Q6 453 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 SMAD5Q99717 465 aaKnown RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 LRRCC1Q9C099 1032 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 ZNF804BA4D1E1 1349 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 COL22A1Q8NFW1 1626 aaPredicted RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 A6NCN8 305 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 H0Y3Z8 333 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 IFRD1O00458 451 aaPredicted RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 RASA1P20936 1047 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 NLRP7Q8WX94 980 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 PCDHGB7Q9Y5F8 929 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 RAD50Q92878 1312 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 GRM8O00222 908 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 CTSWP56202 376 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 MAFFQ9ULX9 164 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 PI4KAP2A4QPH2 592 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 CSPG5O95196 566 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 MYL3P08590 195 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 HOXA10P31260 410 aaPredicted RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 ATP2B2Q01814 1243 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 BIRC3Q13489 604 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 COL19A1Q14993 1142 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 PUM3Q15397 648 aaKnown RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 RSBN1LQ6PCB5 846 aaPredicted RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 ZNF771Q7L3S4 317 aaPredicted RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 LRP10Q7Z4F1 713 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 ZNF444Q8N0Y2 327 aaPredicted RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 PI4KAP1Q8N8J0 262 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 ANKRD42Q8N9B4 389 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 CLIC5Q9NZA1 410 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 TFIP11Q9UBB9 837 aaKnown RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 NOD1Q9Y239 953 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 WDR33Q9C0J8 1336 aaKnown RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 MAP2K5Q13163 448 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 SF3B3Q15393 1217 aaKnown RBP7.55□□□□□ -1.2
SMG1-217ENST00000569764 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 HHIPL1Q96JK4 782 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 TINF2Q9BSI4 451 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 EXOC6BQ9Y2D4 811 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 USP16Q9Y5T5 823 aa7.55□□□□□ -1.2
SMG1-217ENST00000569764 PXDNLA1KZ92 1463 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 F8W031 263 aaPredicted RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 NBNO60934 754 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 MAP3K9P80192 1104 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 MAPRE1Q15691 268 aaKnown RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 SLC10A5Q5PT55 438 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 MFSD14BQ5SR56 506 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 JAKMIP3Q5VZ66 844 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 PGBD3Q8N328 593 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 TBC1D32Q96NH3 1257 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 GNEQ9Y223 722 aaKnown RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 A0A1W2PRQ8 180 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 CCDC66A2RUB6 948 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 AGR2O95994 175 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 MYCLP1P12525 358 aaPredicted RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 CLCN1P35523 988 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 PTPN14Q15678 1187 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 SLC9C1Q4G0N8 1177 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 MAP1SQ66K74 1059 aaPredicted RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 TEX19Q8NA77 164 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 MKNK2Q9HBH9 465 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 CUEDC1Q9NWM3 386 aaPredicted RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 SUN2Q9UH99 717 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 GCLCP48506 637 aaPredicted RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 AOC3Q16853 763 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 BEND3Q5T5X7 828 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 NLRP10Q86W26 655 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 CCDC43Q96MW1 224 aaKnown RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 LARP6Q9BRS8 491 aaKnown RBP7.54□□□□□ -1.2
SMG1-217ENST00000569764 N6AMT1Q9Y5N5 214 aa7.54□□□□□ -1.2
SMG1-217ENST00000569764 TNPO2O14787 897 aaKnown RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 TPPPO94811 219 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 CAMTA2O94983 1202 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 TM4SF1P30408 202 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 PRPHP41219 470 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 PTGER2P43116 358 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 DOK7Q18PE1 504 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 CWF19L2Q2TBE0 894 aaKnown RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 HSP90B2PQ58FF3 399 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 NAA16Q6N069 864 aaPredicted RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 FAM47EQ6ZV65 393 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 RASGRP2Q7LDG7 609 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 FAM89AQ96GI7 184 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 KAZALD1Q96I82 304 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 CASS4Q9NQ75 786 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 SAGE1Q9NXZ1 904 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 GPRC5DQ9NZD1 345 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 FGAP02671 866 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 C7P10643 843 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 GADL1Q6ZQY3 521 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 ELOA2Q8IYF1 753 aaPredicted RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 LPIN2Q92539 896 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms