RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	SLC1A4	P43007	532 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	AK2	P54819	239 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	TROAP	Q12815	778 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	TOB2	Q14106	344 aa	Predicted RBP	14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	PPP2R5B	Q15173	497 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	GADL1	Q6ZQY3	521 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	CTCFL	Q8NI51	663 aa	Predicted RBP	14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	SENP2	Q9HC62	589 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	GPHN	Q9NQX3	736 aa	Predicted RBP	14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	PNMA3	Q9UL41	463 aa		14.02	□□□□□ -0.17
FANCA-231	ENST00000568626	MYPN	Q86TC9	1320 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	GOLGA8B	A8MQT2	603 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L15	C9J2P7	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L13	C9JLJ4	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L11	C9JVI0	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L18	D6R9N7	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L22	D6RA61	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L17	D6RBQ6	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L19	D6RCP7	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L20	D6RJB6	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	PARP1	P09874	1014 aa	Known RBP	14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	ZNF543	Q08ER8	600 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	APOBR	Q0VD83	1088 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	USP17L24	Q0WX57	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	GRM1	Q13255	1194 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	MOGS	Q13724	837 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	GRM4	Q14833	912 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	CCDC96	Q2M329	555 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	OTUD7B	Q6GQQ9	843 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	ANKRD23	Q86SG2	305 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	MICU3	Q86XE3	530 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	SPICE1	Q8N0Z3	855 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	BRI3BP	Q8WY22	251 aa		14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	ZNF274	Q96GC6	653 aa	Predicted RBP	14.01	□□□□□ -0.17
FANCA-231	ENST00000568626	CCDC196	A0A1B0GTZ2	297 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	PLA2G6	O60733	806 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	HOXA7	P31268	230 aa	Predicted RBP	14	□□□□□ -0.17
FANCA-231	ENST00000568626	GNAQ	P50148	359 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	FAM160B2	Q86V87	743 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	NUP133	Q8WUM0	1156 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	CHMP4C	Q96CF2	233 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	LZTS2	Q9BRK4	669 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	TANGO6	Q9C0B7	1094 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	RPAP3	Q9H6T3	665 aa	Predicted RBP	14	□□□□□ -0.17
FANCA-231	ENST00000568626	RBM28	Q9NW13	759 aa	Known RBP	14	□□□□□ -0.17
FANCA-231	ENST00000568626	BRPF3	Q9ULD4	1205 aa		14	□□□□□ -0.17
FANCA-231	ENST00000568626	PARP14	Q460N5	1801 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	GOLGA8A	A7E2F4	631 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	ALDH1A1	P00352	501 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	OSBP	P22059	807 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	TM4SF4	P48230	202 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	METAP2	P50579	478 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	STAT2	P52630	851 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	IRX3	P78415	501 aa	Predicted RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	KIF23	Q02241	960 aa	Predicted RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	RTN1	Q16799	776 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	KIAA1755	Q5JYT7	1200 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	FAM83B	Q5T0W9	1011 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	TREML2	Q5T2D2	321 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	FANCB	Q8NB91	859 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	CHURC1	Q8WUH1	139 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	PARK7	Q99497	189 aa	Known RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	FEM1B	Q9UK73	627 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	ISY1	Q9ULR0	285 aa	Known RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	LIMCH1	Q9UPQ0	1083 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626	MTMR7	Q9Y216	660 aa		13.99	□□□□□ -0.17
FANCA-231	ENST00000568626		A0A0G2JMZ2	1700 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	PALM3	A6NDB9	673 aa	Predicted RBP	13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	BTBD19	C9JJ37	291 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	DHX16	O60231	1041 aa	Known RBP	13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	FDX1	P10109	184 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	PDIA3	P30101	505 aa	Known RBP	13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	DGKZ	Q13574	1117 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	GPAT2	Q6NUI2	795 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	BTNL9	Q6UXG8	535 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	CATSPERG	Q6ZRH7	1159 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	IFNL1	Q8IU54	200 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	NUP88	Q99567	741 aa	Predicted RBP	13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	SLF1	Q9BQI6	1058 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	MYL10	Q9BUA6	226 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	TPCN1	Q9ULQ1	816 aa		13.98	□□□□□ -0.17
FANCA-231	ENST00000568626	TMEM232	C9JQI7	657 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	PDHX	O00330	501 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	PFKFB2	O60825	505 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	AOC2	O75106	756 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	FLOT1	O75955	427 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	SMARCA1	P28370	1054 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	IK	Q13123	557 aa	Predicted RBP	13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	COG2	Q14746	738 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	CPLX2	Q6PUV4	134 aa	Known RBP	13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	KCTD1	Q719H9	257 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	RASGRP2	Q7LDG7	609 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	FAM43A	Q8N2R8	423 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	PRPF38A	Q8NAV1	312 aa	Known RBP	13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	SLK	Q9H2G2	1235 aa	Predicted RBP	13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	MAD2L2	Q9UI95	211 aa		13.97	□□□□□ -0.17

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