RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 ANKRD20A12PQ8NF67 263 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 TAB2Q9NYJ8 693 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 TRIM10Q9UDY6 481 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 GUCA1BQ9UMX6 200 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 SAR1BQ9Y6B6 198 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 A0A087WUV0 522 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-215ENST00000566843 MBD4O95243 580 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 KRT2P35908 639 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 CKAP4Q07065 602 aaKnown RBP17.65■□□□□ 0.42
COMMD4-215ENST00000566843 PAK1Q13153 545 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 EARS2Q5JPH6 523 aaKnown RBP17.65■□□□□ 0.42
COMMD4-215ENST00000566843 RRAGBQ5VZM2 374 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 CMTR1Q8N1G2 835 aaKnown RBP17.65■□□□□ 0.42
COMMD4-215ENST00000566843 DNAJC7Q99615 494 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 FAM107BQ9H098 131 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-215ENST00000566843 ATP1A1P05023 1023 aaKnown RBP17.64■□□□□ 0.41
COMMD4-215ENST00000566843 ITGA6P23229 1130 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 GUCY2CP25092 1073 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.41
COMMD4-215ENST00000566843 HERVK_113P62684 666 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 IRX3P78415 501 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-215ENST00000566843 PKN1Q16512 942 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 OR8K1Q8NGG5 319 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 ARAP2Q8WZ64 1704 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 ERICH2A1L162 156 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 PDE8BO95263 885 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 XBP1P17861 261 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 C8orf37Q96NL8 207 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 HDAC6Q9UBN7 1215 aa17.64■□□□□ 0.41
COMMD4-215ENST00000566843 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 AGPSO00116 658 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 SUGP1Q8IWZ8 645 aaKnown RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 NELFBQ8WX92 580 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 SMARCC1Q92922 1105 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 TNFRSF25Q93038 417 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 PYM1Q9BRP8 204 aaKnown RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 ANKRD18BA2A2Z9 1011 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 WNT7AO00755 349 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 ATP2C1P98194 919 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 ZNF658Q5TYW1 1059 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-215ENST00000566843 TADA2BQ86TJ2 420 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 EHBP1Q8NDI1 1231 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 GREM2Q9H772 168 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 ARMT1Q9H993 441 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
COMMD4-215ENST00000566843 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 TTC26A0AVF1 554 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 COBLO75128 1261 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 GNAT2P19087 354 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 GGCXP38435 758 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 FUT2Q10981 343 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 PNPLA7Q6ZV29 1317 aa17.62■□□□□ 0.41
COMMD4-215ENST00000566843 H7C1D1 291 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 ENC1O14682 589 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 PRPF3O43395 683 aaKnown RBP17.61■□□□□ 0.41
COMMD4-215ENST00000566843 FGFR2P21802 821 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 UBXN1Q04323 297 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 SEC23AQ15436 765 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 RRP12Q5JTH9 1297 aaKnown RBP17.61■□□□□ 0.41
COMMD4-215ENST00000566843 WDR59Q6PJI9 974 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 IRF2BP1Q8IU81 584 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 MAGEB6Q8N7X4 407 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 ZNF507Q8TCN5 953 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 MTRQ99707 1265 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 PLEKHA4Q9H4M7 779 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 VPS54Q9P1Q0 977 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 PLCH1Q4KWH8 1693 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 ANO9A1A5B4 782 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 KRT83P78385 493 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 MAP3K12Q12852 859 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 NKX1-1Q15270 411 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-215ENST00000566843 MEA1Q16626 185 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 CCDC122Q5T0U0 273 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 CRACR2AQ9BSW2 395 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 SELENOOQ9BVL4 669 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 BLZF1Q9H2G9 400 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 RNF41Q9H4P4 317 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-215ENST00000566843 RMND1Q9NWS8 449 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 MYH2Q9UKX2 1941 aa17.61■□□□□ 0.41
COMMD4-215ENST00000566843 LGALS16A8MUM7 142 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 CTSWP56202 376 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 TTC38Q5R3I4 469 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 FAM76AQ8TAV0 307 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms