RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 PROCA1Q8NCQ7 364 aaPredicted RBP17.27■□□□□ 0.36
SPG7-213ENST00000566221 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 MYL10Q9BUA6 226 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 WDR46O15213 610 aaKnown RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 CETPP11597 493 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 VCAM1P19320 739 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 KIF5BP33176 963 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 SLC1A4P43007 532 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 METAP2P50579 478 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPG7-213ENST00000566221 GRM4Q14833 912 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 ASPRV1Q53RT3 343 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 CTCFLQ8NI51 663 aaPredicted RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 SNX21Q969T3 373 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
SPG7-213ENST00000566221 A0A0G2JMZ2 1700 aa17.26■□□□□ 0.35
SPG7-213ENST00000566221 FAM155AB1AL88 458 aaPredicted RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 PARP1P09874 1014 aaKnown RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 RXRAP19793 462 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 PPP2R5BQ15173 497 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 RTN1Q16799 776 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 DEFB115Q30KQ5 88 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 KIAA1755Q5JYT7 1200 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 GPATCH4Q5T3I0 446 aaKnown RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 GADL1Q6ZQY3 521 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 FASTKD5Q7L8L6 764 aaKnown RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 RASGRP2Q7LDG7 609 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 RAB11FIP4Q86YS3 637 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
SPG7-213ENST00000566221 HPS5Q9UPZ3 1129 aa17.25■□□□□ 0.35
SPG7-213ENST00000566221 CCDC196A0A1B0GTZ2 297 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 MANSC4A6NHS7 340 aaPredicted RBP17.24■□□□□ 0.35
SPG7-213ENST00000566221 PFKFB2O60825 505 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 HSPA8P11142 646 aaKnown RBP17.24■□□□□ 0.35
SPG7-213ENST00000566221 BMP3P12645 472 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 DGKZQ13574 1117 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 ME3Q16798 604 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 FAM83BQ5T0W9 1011 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 MS4A4AQ96JQ5 239 aa17.24■□□□□ 0.35
SPG7-213ENST00000566221 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 LARGE1O95461 756 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 GNAQP50148 359 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 STK3Q13188 491 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 NOGQ13253 232 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 MOGSQ13724 837 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 CCL15Q16663 113 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 CAPNS2Q96L46 248 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
SPG7-213ENST00000566221 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
SPG7-213ENST00000566221 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
SPG7-213ENST00000566221 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
SPG7-213ENST00000566221 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
SPG7-213ENST00000566221 K7ELQ4 463 aaPredicted RBP17.22■□□□□ 0.35
SPG7-213ENST00000566221 STAT2P52630 851 aa17.22■□□□□ 0.35
SPG7-213ENST00000566221 PABPC4Q13310 644 aaKnown RBP eCLIP17.22■□□□□ 0.35
SPG7-213ENST00000566221 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
SPG7-213ENST00000566221 BRI3BPQ8WY22 251 aa17.22■□□□□ 0.35
SPG7-213ENST00000566221 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
SPG7-213ENST00000566221 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
SPG7-213ENST00000566221 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
SPG7-213ENST00000566221 RBBP6Q7Z6E9 1792 aaKnown RBP17.21■□□□□ 0.35
SPG7-213ENST00000566221 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L15C9J2P7 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L13C9JLJ4 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L11C9JVI0 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 KLRF2D3W0D1 207 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L18D6R9N7 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L22D6RA61 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L17D6RBQ6 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L19D6RCP7 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L20D6RJB6 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 DHX16O60231 1041 aaKnown RBP17.21■□□□□ 0.35
SPG7-213ENST00000566221 PLA2G6O60733 806 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
SPG7-213ENST00000566221 USP17L24Q0WX57 530 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 SREBF2Q12772 1141 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
SPG7-213ENST00000566221 GRM1Q13255 1194 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 BECN1Q14457 450 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms