RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CCAR1Q8IX12 1150 aaKnown RBP18.24■□□□□ 0.51
COMMD4-212ENST00000565517 SLAIN1Q8ND83 568 aa18.24■□□□□ 0.51
COMMD4-212ENST00000565517 PXYLP1Q8TE99 480 aa18.24■□□□□ 0.51
COMMD4-212ENST00000565517 ZNF333Q96JL9 665 aa18.24■□□□□ 0.51
COMMD4-212ENST00000565517 CENPFP49454 3210 aa18.23■□□□□ 0.51
COMMD4-212ENST00000565517 RAD21O60216 631 aa18.23■□□□□ 0.51
COMMD4-212ENST00000565517 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
COMMD4-212ENST00000565517 ESR2Q92731 530 aa18.23■□□□□ 0.51
COMMD4-212ENST00000565517 PORCNQ9H237 461 aa18.23■□□□□ 0.51
COMMD4-212ENST00000565517 PPP1R9AQ9ULJ8 1098 aa18.23■□□□□ 0.51
COMMD4-212ENST00000565517 STX8Q9UNK0 236 aa18.23■□□□□ 0.51
COMMD4-212ENST00000565517 ADCY3O60266 1144 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 NMT2O60551 498 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 GPR142Q7Z601 462 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
COMMD4-212ENST00000565517 SH3TC2Q8TF17 1288 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 SOCS4Q8WXH5 440 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 ATG4CQ96DT6 458 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 TTC14Q96N46 770 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 NUDT12Q9BQG2 462 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 SPATC1LQ9H0A9 340 aa18.22■□□□□ 0.51
COMMD4-212ENST00000565517 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 PLEKHH3Q7Z736 793 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 SKAP1Q86WV1 359 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 PRPF38AQ8NAV1 312 aaKnown RBP18.21■□□□□ 0.51
COMMD4-212ENST00000565517 SHCBP1Q8NEM2 672 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
COMMD4-212ENST00000565517 ZNFX1Q9P2E3 1918 aaKnown RBP18.21■□□□□ 0.51
COMMD4-212ENST00000565517 VWA5AO00534 786 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 BMP3P12645 472 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 XRCC5P13010 732 aaKnown RBP18.2■□□□□ 0.5
COMMD4-212ENST00000565517 PTH1RQ03431 593 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 CCDC178Q5BJE1 867 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 MORN1Q5T089 497 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 USP6NLQ92738 828 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 MAP4K1Q92918 833 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-212ENST00000565517 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 MOV10L1Q9BXT6 1211 aaKnown RBP18.2■□□□□ 0.5
COMMD4-212ENST00000565517 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-212ENST00000565517 KIAA0100Q14667 2235 aaKnown RBP18.2■□□□□ 0.5
COMMD4-212ENST00000565517 NEDD4P46934 1319 aa18.2■□□□□ 0.5
COMMD4-212ENST00000565517 SLC15A5A6NIM6 579 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 STRNO43815 780 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 PLA2G6O60733 806 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 TOP1P11387 765 aaKnown RBP18.19■□□□□ 0.5
COMMD4-212ENST00000565517 SOX10P56693 466 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 UBXN2AP68543 259 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 TMEM132BQ14DG7 1078 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 KRT23Q9C075 422 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 MROH8Q9H579 483 aa18.19■□□□□ 0.5
COMMD4-212ENST00000565517 CWC22Q9HCG8 908 aaKnown RBP18.19■□□□□ 0.5
COMMD4-212ENST00000565517 SLC25A27O95847 323 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 FDX1P10109 184 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 PTPREP23469 700 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 SLC1A4P43007 532 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 IQCA1Q86XH1 822 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 DGKHQ86XP1 1220 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
COMMD4-212ENST00000565517 REPS2Q8NFH8 660 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 CHURC1Q8WUH1 139 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-212ENST00000565517 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 ZNF236Q9UL36 1845 aa18.18■□□□□ 0.5
COMMD4-212ENST00000565517 B4E1Z4 1266 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 ATP2A1O14983 1001 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 KDM4AO75164 1064 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 ELNP15502 786 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 ERCC3P19447 782 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 MCCP23508 829 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 COPB2P35606 906 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 RGS2P41220 211 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 MAP2K5Q13163 448 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 PLS1Q14651 629 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 WDR78Q5VTH9 848 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-212ENST00000565517 FAM160B2Q86V87 743 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 RIOX2Q8IUF8 465 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 NKX2-3Q8TAU0 364 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 ZSWIM5Q9P217 1185 aa18.17■□□□□ 0.5
COMMD4-212ENST00000565517 ZNF214Q9UL59 606 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-212ENST00000565517 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 ZBED4O75132 1171 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 CYP21A2P08686 494 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 CYP2B6P20813 491 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 STAT3P40763 770 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 STAT2P52630 851 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 GRB14Q14449 540 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 ABRAQ8N0Z2 381 aa18.16■□□□□ 0.5
COMMD4-212ENST00000565517 ANKS1AQ92625 1134 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms