RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 GBP3Q9H0R5 595 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ADGRE2Q9UHX3 823 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 R3HCC1Q9Y3T6 440 aaKnown RBP4.7□□□□□ -1.66
CHD9-207ENST00000562806 A0A1W2PQH9 124 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 LRRN2O75325 713 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 RAC2P15153 192 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
CHD9-207ENST00000562806 AFMP43652 599 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 PCBP3P57721 371 aaKnown RBP4.69□□□□□ -1.66
CHD9-207ENST00000562806 SLC7A5Q01650 507 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 DUSP4Q13115 394 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 PPP2R5EQ16537 467 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 GNPTABQ3T906 1256 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 NOL9Q5SY16 702 aaKnown RBP4.69□□□□□ -1.66
CHD9-207ENST00000562806 ZNF574Q6ZN55 896 aaPredicted RBP4.69□□□□□ -1.66
CHD9-207ENST00000562806 CBLL1Q75N03 491 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 LINC00116Q8NCU8 138 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 ARMC5Q96C12 935 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 ANAPC16Q96DE5 110 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 HDAC8Q9BY41 377 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 CARS2Q9HA77 564 aaKnown RBP4.69□□□□□ -1.66
CHD9-207ENST00000562806 RC3H2Q9HBD1 1191 aaKnown RBP4.69□□□□□ -1.66
CHD9-207ENST00000562806 CHST7Q9NS84 486 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 PRKAG3Q9UGI9 489 aa4.69□□□□□ -1.66
CHD9-207ENST00000562806 ESR1P03372 595 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 GSNP06396 782 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 FGRP09769 529 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 ITGA4P13612 1032 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 GDNFP39905 211 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 NOP2P46087 812 aaKnown RBP4.68□□□□□ -1.66
CHD9-207ENST00000562806 EGR3Q06889 387 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 NAALADL2Q58DX5 795 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 XP32Q5T750 250 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 CWF19L1Q69YN2 538 aaKnown RBP4.68□□□□□ -1.66
CHD9-207ENST00000562806 RUFY4Q6ZNE9 571 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 WFDC3Q8IUB2 231 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 SPPL2CQ8IUH8 684 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 CRACR2BQ8N4Y2 399 aaPredicted RBP4.68□□□□□ -1.66
CHD9-207ENST00000562806 OXR1Q8N573 874 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 FLAD1Q8NFF5 587 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 ASIC4Q96FT7 647 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 PRDM14Q9GZV8 571 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 MBNL3Q9NUK0 354 aaKnown RBP4.68□□□□□ -1.66
CHD9-207ENST00000562806 ACTR10Q9NZ32 417 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 WHRNQ9P202 907 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 DIS3Q9Y2L1 958 aaKnown RBP4.68□□□□□ -1.66
CHD9-207ENST00000562806 SF3B6Q9Y3B4 125 aaKnown RBP4.68□□□□□ -1.66
CHD9-207ENST00000562806 FHOD1Q9Y613 1164 aa4.68□□□□□ -1.66
CHD9-207ENST00000562806 PPM1BO75688 479 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 RNASE1P07998 156 aaKnown RBP4.67□□□□□ -1.66
CHD9-207ENST00000562806 CD247P20963 164 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 CHRNEQ04844 493 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 SF3A1Q15459 793 aaKnown RBP4.67□□□□□ -1.66
CHD9-207ENST00000562806 FXNQ16595 210 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 HEATR6Q6AI08 1181 aaKnown RBP4.67□□□□□ -1.66
CHD9-207ENST00000562806 VHLLQ6RSH7 139 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 NPM2Q86SE8 214 aaKnown RBP4.67□□□□□ -1.66
CHD9-207ENST00000562806 TCTN2Q96GX1 697 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 DSCC1Q9BVC3 393 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 TMEM59LQ9UK28 342 aa4.67□□□□□ -1.66
CHD9-207ENST00000562806 ANKRD34BA5PLL1 514 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 PRAMEF1O95521 474 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 ATP2B1P20020 1258 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 BMP8BP34820 402 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 CD96P40200 585 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 ZYXQ15942 572 aaKnown RBP4.66□□□□□ -1.66
CHD9-207ENST00000562806 SOGA3Q5TF21 947 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 MCTP1Q6DN14 999 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 MCF2L2Q86YR7 1114 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 LILRA2Q8N149 483 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 ANKS4BQ8N8V4 417 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 PDZD8Q8NEN9 1154 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 ZNF512BQ96KM6 892 aaPredicted RBP4.66□□□□□ -1.66
CHD9-207ENST00000562806 GP6Q9HCN6 339 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 SLAMF8Q9P0V8 285 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 TCFL5Q9UL49 500 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 PCDHA11Q9Y5I1 949 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 LTBP3Q9NS15 1303 aa4.66□□□□□ -1.66
CHD9-207ENST00000562806 SHISA3A0PJX4 238 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 FITM1A5D6W6 292 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 FAM86C2PA6NEL3 165 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 C9IYK1 514 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 SMAD7O15105 426 aaKnown RBP4.65□□□□□ -1.67
CHD9-207ENST00000562806 PAX4O43316 350 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 STK10O94804 968 aaKnown RBP4.65□□□□□ -1.67
CHD9-207ENST00000562806 ITGB5P18084 799 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 KIR2DL1P43626 348 aaPredicted RBP4.65□□□□□ -1.67
CHD9-207ENST00000562806 KIR2DL2P43627 348 aaPredicted RBP4.65□□□□□ -1.67
CHD9-207ENST00000562806 POU4F1Q01851 419 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 TEKQ02763 1124 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 SNX17Q15036 470 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 AXDND1Q5T1B0 1012 aaPredicted RBP4.65□□□□□ -1.67
CHD9-207ENST00000562806 NBPF6Q5VWK0 638 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 POMZP3Q6PJE2 187 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 TMC3Q7Z5M5 1100 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 CKAP2LQ8IYA6 745 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 USHBP1Q8N6Y0 703 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 LRRN4CLQ8ND94 238 aa4.65□□□□□ -1.67
CHD9-207ENST00000562806 RCC1LQ96I51 464 aaKnown RBP4.65□□□□□ -1.67
CHD9-207ENST00000562806 NBPF4Q96M43 638 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms