RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 GPATCH11Q8N954 259 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 KAT14Q9H8E8 782 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 ESPNB1AK53 854 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 ZNF157P51786 506 aaPredicted RBP13.57□□□□□ -0.24
HERC1-214ENST00000561400 BACE1P56817 501 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 PPIL2Q13356 520 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
HERC1-214ENST00000561400 CHMP4CQ96CF2 233 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 WNK4Q96J92 1243 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 MYL10Q9BUA6 226 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 KIAA1683Q9H0B3 1180 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
HERC1-214ENST00000561400 CCDC69A6NI79 296 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
HERC1-214ENST00000561400 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 RASAL3Q86YV0 1011 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 FEZ1Q99689 392 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 KCNH4Q9UQ05 1017 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 KLF18A0A0U1RQI7 1052 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 F5H6K3 240 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 HMGCS2P54868 508 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 EVCP57679 992 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 HTRA3P83110 453 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 KLRC3Q07444 240 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 TROAPQ12815 778 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 SPRYD7Q5W111 196 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 SPICE1Q8N0Z3 855 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 HHIPL1Q96JK4 782 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
HERC1-214ENST00000561400 RAD21O60216 631 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 ST18O60284 1047 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 RXRAP19793 462 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 FAM13BQ9NYF5 915 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 SLC12A7Q9Y666 1083 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 LOC285556D6RIA3 1793 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
HERC1-214ENST00000561400 CXCL11O14625 94 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 NDUFB10O96000 172 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 ZBTB48P10074 688 aaPredicted RBP13.55□□□□□ -0.24
HERC1-214ENST00000561400 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 GMCL1P1Q8NEA9 526 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
HERC1-214ENST00000561400 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
HERC1-214ENST00000561400 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
HERC1-214ENST00000561400 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 LARGE1O95461 756 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 SLC10A3P09131 477 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 PDHBP11177 359 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
HERC1-214ENST00000561400 SH3D19Q5HYK7 790 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
HERC1-214ENST00000561400 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 NUP88Q99567 741 aaPredicted RBP13.54□□□□□ -0.24
HERC1-214ENST00000561400 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 BAZ2BQ9UIF8 2168 aaKnown RBP13.54□□□□□ -0.24
HERC1-214ENST00000561400 HPS5Q9UPZ3 1129 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 MOGSQ13724 837 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 USP17L2Q6R6M4 530 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 CCDC144CPQ8IYA2 1237 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 NUP133Q8WUM0 1156 aa13.54□□□□□ -0.24
HERC1-214ENST00000561400 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 PCNTO95613 3336 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 GOLGA8BA8MQT2 603 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 MAFGO15525 162 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 ZBTB43O43298 467 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 USP14P54578 494 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 ME3Q16798 604 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
HERC1-214ENST00000561400 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
HERC1-214ENST00000561400 DDAH1O94760 285 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 VCAM1P19320 739 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 STK3Q13188 491 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 SNAPC2Q13487 334 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 SYNE3Q6ZMZ3 975 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 CCDC102AQ96A19 550 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 GMCL1Q96IK5 515 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 RLFQ13129 1914 aa13.52□□□□□ -0.24
HERC1-214ENST00000561400 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 SLC1A4P43007 532 aa13.52□□□□□ -0.25
HERC1-214ENST00000561400 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms