RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 ATP6V1DQ9Y5K8 247 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 PRPF40AO75400 957 aaKnown RBP25.83■■□□□ 1.73
SNX22-205ENST00000560945 SCG2P13521 617 aa25.83■■□□□ 1.73
SNX22-205ENST00000560945 SLC16A2P36021 539 aa25.83■■□□□ 1.73
SNX22-205ENST00000560945 PFKFB3Q16875 520 aaPredicted RBP25.83■■□□□ 1.73
SNX22-205ENST00000560945 SPZ1Q9BXG8 430 aa25.83■■□□□ 1.73
SNX22-205ENST00000560945 BAZ2BQ9UIF8 2168 aaKnown RBP25.83■■□□□ 1.72
SNX22-205ENST00000560945 FIBPO43427 364 aa25.82■■□□□ 1.72
SNX22-205ENST00000560945 NDUFB10O96000 172 aa25.82■■□□□ 1.72
SNX22-205ENST00000560945 MMP1P03956 469 aa25.82■■□□□ 1.72
SNX22-205ENST00000560945 DCPSQ96C86 337 aaKnown RBP25.82■■□□□ 1.72
SNX22-205ENST00000560945 LZTS2Q9BRK4 669 aa25.82■■□□□ 1.72
SNX22-205ENST00000560945 FTOQ9C0B1 505 aaKnown RBP eCLIP25.82■■□□□ 1.72
SNX22-205ENST00000560945 SCN4AP35499 1836 aa25.82■■□□□ 1.72
SNX22-205ENST00000560945 MYH6P13533 1939 aa25.82■■□□□ 1.72
SNX22-205ENST00000560945 PRKG1Q13976 671 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 HOMER1Q86YM7 354 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 SPICE1Q8N0Z3 855 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 OXER1Q8TDS5 423 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 PIGSQ96S52 555 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 ZNF341Q9BYN7 854 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 ISY1Q9ULR0 285 aaKnown RBP25.81■■□□□ 1.72
SNX22-205ENST00000560945 PPP2R3BQ9Y5P8 575 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 ADAMTS3O15072 1205 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 ZYXQ15942 572 aaKnown RBP25.81■■□□□ 1.72
SNX22-205ENST00000560945 USP50Q70EL3 339 aaPredicted RBP25.81■■□□□ 1.72
SNX22-205ENST00000560945 GMCL1P1Q8NEA9 526 aa25.81■■□□□ 1.72
SNX22-205ENST00000560945 TAF1DQ9H5J8 278 aaPredicted RBP25.81■■□□□ 1.72
SNX22-205ENST00000560945 POLR2AP24928 1970 aaKnown RBP25.8■■□□□ 1.72
SNX22-205ENST00000560945 ASNSP08243 561 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 SLC1A4P43007 532 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 DCAF15Q66K64 600 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 TYW1BQ6NUM6 668 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 USP48Q86UV5 1035 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 DCAF4Q8WV16 495 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 ZKSCAN4Q969J2 545 aaPredicted RBP25.8■■□□□ 1.72
SNX22-205ENST00000560945 PHF20Q9BVI0 1012 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 RIOX1Q9H6W3 641 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 ARHGEF10LQ9HCE6 1279 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 TMX2Q9Y320 296 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 ATAD5Q96QE3 1844 aa25.8■■□□□ 1.72
SNX22-205ENST00000560945 BTBD18B2RXH4 712 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 GOLGA6L22H0YM25 854 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 EAPPQ56P03 285 aaPredicted RBP25.79■■□□□ 1.72
SNX22-205ENST00000560945 WWC2Q6AWC2 1192 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 DIS3L2Q8IYB7 885 aaKnown RBP25.79■■□□□ 1.72
SNX22-205ENST00000560945 WRNIP1Q96S55 665 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 ZNF112Q9UJU3 913 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 CTNND1O60716 968 aaKnown RBP25.79■■□□□ 1.72
SNX22-205ENST00000560945 NR5A1Q13285 461 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 NPY5RQ15761 445 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 RGS22Q8NE09 1264 aa25.79■■□□□ 1.72
SNX22-205ENST00000560945 CEBPZQ03701 1054 aaKnown RBP25.78■■□□□ 1.72
SNX22-205ENST00000560945 GPATCH4Q5T3I0 446 aaKnown RBP25.78■■□□□ 1.72
SNX22-205ENST00000560945 KRT26Q7Z3Y9 468 aa25.78■■□□□ 1.72
SNX22-205ENST00000560945 SULF1Q8IWU6 871 aa25.78■■□□□ 1.72
SNX22-205ENST00000560945 ADGRF4Q8IZF3 695 aa25.78■■□□□ 1.72
SNX22-205ENST00000560945 JMJD4Q9H9V9 463 aa25.78■■□□□ 1.72
SNX22-205ENST00000560945 WDR90Q96KV7 1748 aa25.78■■□□□ 1.72
SNX22-205ENST00000560945 TCHHQ07283 1943 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 GADD45BO75293 160 aaPredicted RBP25.77■■□□□ 1.72
SNX22-205ENST00000560945 POTEIP0CG38 1075 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 POTEJP0CG39 1038 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 HEATR3Q7Z4Q2 680 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 RRP36Q96EU6 259 aaKnown RBP25.77■■□□□ 1.72
SNX22-205ENST00000560945 USP17L10C9JJH3 530 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 U2AF2P26368 475 aaKnown RBP eCLIP25.77■■□□□ 1.72
SNX22-205ENST00000560945 SMARCA1P28370 1054 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 KRT85P78386 507 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 DGKZQ13574 1117 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 TPRNQ4KMQ1 711 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 GMCL1Q96IK5 515 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 USP28Q96RU2 1077 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 ANP32EQ9BTT0 268 aa25.77■■□□□ 1.72
SNX22-205ENST00000560945 RBM27Q9P2N5 1060 aaKnown RBP25.77■■□□□ 1.72
SNX22-205ENST00000560945 STXBP3O00186 592 aa25.76■■□□□ 1.71
SNX22-205ENST00000560945 KLRG1Q96E93 195 aa25.76■■□□□ 1.71
SNX22-205ENST00000560945 USP2O75604 605 aaPredicted RBP25.75■■□□□ 1.71
SNX22-205ENST00000560945 GNL2Q13823 731 aaKnown RBP25.75■■□□□ 1.71
SNX22-205ENST00000560945 SUPT20HL1Q3ZLR7 823 aa25.75■■□□□ 1.71
SNX22-205ENST00000560945 NOM1Q5C9Z4 860 aaKnown RBP25.75■■□□□ 1.71
SNX22-205ENST00000560945 MYSM1Q5VVJ2 828 aa25.75■■□□□ 1.71
SNX22-205ENST00000560945 HOOK2Q96ED9 719 aa25.75■■□□□ 1.71
SNX22-205ENST00000560945 FAM205CA6NFA0 338 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 TRAK2O60296 914 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 BMP3P12645 472 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 XBP1P17861 261 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 SNAP25P60880 206 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 BRAPQ7Z569 592 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 SCYL3Q8IZE3 742 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 TMEM87AQ8NBN3 555 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 VCPKMTQ9H867 229 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 MYH15Q9Y2K3 1946 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 IQCA1LA6NCM1 817 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 PPP1R11O60927 126 aaPredicted RBP25.74■■□□□ 1.71
SNX22-205ENST00000560945 NLRP5P59047 1200 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 SAFBQ15424 915 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNX22-205ENST00000560945 EARS2Q5JPH6 523 aaKnown RBP25.74■■□□□ 1.71
SNX22-205ENST00000560945 FAM83BQ5T0W9 1011 aa25.74■■□□□ 1.71
SNX22-205ENST00000560945 GOPCQ9HD26 462 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms