RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 TTLL1O95922 423 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 ATP2C1P98194 919 aaPredicted RBP28.69■■■□□ 2.18
SHF-208ENST00000560734 CCDC93Q567U6 631 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 KIAA0825Q8IV33 1275 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 AOC3Q16853 763 aa28.68■■■□□ 2.18
SHF-208ENST00000560734 RRP36Q96EU6 259 aaKnown RBP28.68■■■□□ 2.18
SHF-208ENST00000560734 CCDC34Q96HJ3 373 aa28.68■■■□□ 2.18
SHF-208ENST00000560734 RIOX1Q9H6W3 641 aa28.68■■■□□ 2.18
SHF-208ENST00000560734 MYH8P13535 1937 aa28.68■■■□□ 2.18
SHF-208ENST00000560734 ADAMTSL1Q8N6G6 1762 aa28.68■■■□□ 2.18
SHF-208ENST00000560734 PSME4Q14997 1843 aa28.67■■■□□ 2.18
SHF-208ENST00000560734 GOLGA6L6A8MZA4 724 aa28.67■■■□□ 2.18
SHF-208ENST00000560734 STXBP3O00186 592 aa28.67■■■□□ 2.18
SHF-208ENST00000560734 AKR1B1P15121 316 aa28.67■■■□□ 2.18
SHF-208ENST00000560734 WWC2Q6AWC2 1192 aa28.67■■■□□ 2.18
SHF-208ENST00000560734 CNNM3Q8NE01 707 aa28.67■■■□□ 2.18
SHF-208ENST00000560734 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.67■■■□□ 2.18
SHF-208ENST00000560734 FAM205CA6NFA0 338 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 ARL6IP4Q66PJ3 421 aaKnown RBP28.66■■■□□ 2.18
SHF-208ENST00000560734 ZMYND12Q9H0C1 365 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 PI4KBQ9UBF8 816 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 BECN2A8MW95 431 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 PDHBP11177 359 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 VEGFAP15692 232 aaPredicted RBP28.66■■■□□ 2.18
SHF-208ENST00000560734 LONRF3Q496Y0 759 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 METTL16Q86W50 562 aaKnown RBP28.66■■■□□ 2.18
SHF-208ENST00000560734 PLA2G4DQ86XP0 818 aa28.66■■■□□ 2.18
SHF-208ENST00000560734 FOXP4Q8IVH2 680 aaPredicted RBP28.66■■■□□ 2.18
SHF-208ENST00000560734 PYM1Q9BRP8 204 aaKnown RBP28.66■■■□□ 2.18
SHF-208ENST00000560734 ESYT2A0FGR8 921 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 PPIP5K2O43314 1243 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 ENTPD3O75355 529 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 CDC25BP30305 580 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 NFIAQ12857 509 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 SOGA3Q5TF21 947 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 PIK3AP1Q6ZUJ8 805 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 DHX40Q8IX18 779 aaKnown RBP28.65■■■□□ 2.18
SHF-208ENST00000560734 KIF13BQ9NQT8 1826 aa28.65■■■□□ 2.18
SHF-208ENST00000560734 OFD1O75665 1012 aa28.64■■■□□ 2.18
SHF-208ENST00000560734 MDM2Q00987 491 aaPredicted RBP28.64■■■□□ 2.18
SHF-208ENST00000560734 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.64■■■□□ 2.18
SHF-208ENST00000560734 CSRNP2Q9H175 543 aa28.64■■■□□ 2.18
SHF-208ENST00000560734 SEC63Q9UGP8 760 aaKnown RBP28.64■■■□□ 2.18
SHF-208ENST00000560734 ATRNL1Q5VV63 1379 aa28.64■■■□□ 2.17
SHF-208ENST00000560734 ATP2B1P20020 1258 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 GNA11P29992 359 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 NT5DC1Q5TFE4 455 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 ZNF219Q9P2Y4 722 aaPredicted RBP28.63■■■□□ 2.17
SHF-208ENST00000560734 FAM198AQ9UFP1 575 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 C21orf2O43822 256 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 ZNF75DP51815 510 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 PLCB2Q00722 1185 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 GRIN1Q05586 938 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 USP17L2Q6R6M4 530 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 HEATR3Q7Z4Q2 680 aa28.63■■■□□ 2.17
SHF-208ENST00000560734 GPKOWQ92917 476 aaPredicted RBP eCLIP28.63■■■□□ 2.17
SHF-208ENST00000560734 TERF1P54274 439 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 PTGDRQ13258 359 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 TYW1BQ6NUM6 668 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 MKL1Q969V6 931 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 C6orf50Q9HD87 102 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 PCDHA6Q9UN73 950 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 PCDHA8Q9Y5H6 950 aa28.62■■■□□ 2.17
SHF-208ENST00000560734 CCDC194A0A1B0GVG4 234 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 SMTNL1A8MU46 457 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 USP17L5A8MUK1 530 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 LAD1O00515 517 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 GOLGA8HP0CJ92 632 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 RBM5P52756 815 aaKnown RBP eCLIP28.61■■■□□ 2.17
SHF-208ENST00000560734 ZNF174Q15697 407 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 DPCR1Q3MIW9 517 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 GPATCH4Q5T3I0 446 aaKnown RBP28.61■■■□□ 2.17
SHF-208ENST00000560734 TATDN1Q6P1N9 297 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 PIBF1Q8WXW3 757 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 MRFAP1L1Q96HT8 127 aa28.61■■■□□ 2.17
SHF-208ENST00000560734 YDJCA8MPS7 323 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 IKBKBO14920 756 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 POLR2DO15514 142 aaKnown RBP28.6■■■□□ 2.17
SHF-208ENST00000560734 ORC2Q13416 577 aaPredicted RBP28.6■■■□□ 2.17
SHF-208ENST00000560734 TRIML1Q8N9V2 468 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 TRIM5Q9C035 493 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 KCNA3P22001 575 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 KRT25Q7Z3Z0 450 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 CLIP2Q9UDT6 1046 aa28.6■■■□□ 2.17
SHF-208ENST00000560734 SIPA1L1O43166 1804 aa28.59■■■□□ 2.17
SHF-208ENST00000560734 ACTN4O43707 911 aaKnown RBP28.59■■■□□ 2.17
SHF-208ENST00000560734 MYO1BO43795 1136 aa28.59■■■□□ 2.17
SHF-208ENST00000560734 ZNF543Q08ER8 600 aa28.59■■■□□ 2.17
SHF-208ENST00000560734 POSTNQ15063 836 aa28.59■■■□□ 2.17
SHF-208ENST00000560734 NOM1Q5C9Z4 860 aaKnown RBP28.59■■■□□ 2.17
SHF-208ENST00000560734 PPP1R18Q6NYC8 613 aa28.59■■■□□ 2.17
SHF-208ENST00000560734 ERCC4Q92889 916 aaPredicted RBP28.59■■■□□ 2.17
SHF-208ENST00000560734 NYAP2Q9P242 653 aa28.59■■■□□ 2.17
SHF-208ENST00000560734 BAZ2BQ9UIF8 2168 aaKnown RBP28.59■■■□□ 2.17
SHF-208ENST00000560734 LONP1P36776 959 aaKnown RBP28.58■■■□□ 2.17
SHF-208ENST00000560734 NAPAP54920 295 aa28.58■■■□□ 2.17
SHF-208ENST00000560734 TPM4P67936 248 aa28.58■■■□□ 2.17
SHF-208ENST00000560734 RSBN1LQ6PCB5 846 aaPredicted RBP28.58■■■□□ 2.17
SHF-208ENST00000560734 ZFPM1Q8IX07 1006 aa28.58■■■□□ 2.17
SHF-208ENST00000560734 C4orf32Q8N8J7 132 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms