RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LRRC69Q6ZNQ3 347 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 CCDC191Q8NCU4 936 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 TRMT2BQ96GJ1 504 aaKnown RBP7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 DEF6Q9H4E7 631 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 VPS45Q9NRW7 570 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 SLC5A4Q9NY91 659 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 SUFUQ9UMX1 484 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 TNNQ9UQP3 1299 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 ALKQ9UM73 1620 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 GOLIM4O00461 696 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 PF4P02776 101 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 VDRP11473 427 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 ECE1P42892 770 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 ZSCAN26Q16670 478 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 TTC31Q49AM3 519 aaPredicted RBP7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 C4orf48Q5BLP8 95 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 GK5Q6ZS86 529 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 KLRG1Q96E93 195 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 PTPRCP08575 1304 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 FAM83GA6ND36 823 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 SDSP20132 328 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 MAP2K1Q02750 393 aaPredicted RBP7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 LRRTM3Q86VH5 581 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 ZNF354CQ86Y25 554 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 C16orf45Q96MC5 204 aaPredicted RBP7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 FERD3LQ96RJ6 166 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 SAP30BPQ9UHR5 308 aaKnown RBP7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 PLEKHG2Q9H7P9 1386 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 A2ML1A8K2U0 1454 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 EYA4O95677 639 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 SOX5P35711 763 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 TDO2P48775 406 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 CNTD1Q8N815 330 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 ERO1AQ96HE7 468 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 KMT5AQ9NQR1 393 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 RRP15Q9Y3B9 282 aaKnown RBP7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 LRRFIP2Q9Y608 721 aaKnown RBP7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 FHOD1Q9Y613 1164 aa7.72□□□□□ -1.17
TSPAN3-209ENST00000560715 PTPRMP28827 1452 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 SETD1AO15047 1707 aaKnown RBP7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 F5H423 210 aaPredicted RBP7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 MAPK9P45984 424 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 TPM4P67936 248 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 GPS2Q13227 327 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 SART3Q15020 963 aaKnown RBP7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 RNF217Q8TC41 542 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 POF1BQ8WVV4 589 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 NUDT12Q9BQG2 462 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 SARGQ9BW04 601 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 IFT122Q9HBG6 1241 aa7.71□□□□□ -1.17
TSPAN3-209ENST00000560715 NSD3Q9BZ95 1437 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 YTHDC2Q9H6S0 1430 aaKnown RBP7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 PRRT4C9JH25 899 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 HTATSF1O43719 755 aaKnown RBP7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 ZRANB2O95218 330 aaKnown RBP eCLIP7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 CELA3AP09093 270 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 ZNF853P0CG23 659 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 MAGEA9P43362 315 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 FXR2P51116 673 aaKnown RBP eCLIP7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 MORC3Q14149 939 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 ZNF460Q14592 562 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 LRP10Q7Z4F1 713 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 ABTB2Q8N961 1025 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 SLC7A3Q8WY07 619 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 GTF3C6Q969F1 213 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 CHAMP1Q96JM3 812 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 APOL5Q9BWW9 433 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 LGR4Q9BXB1 951 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 ZNF215Q9UL58 517 aaPredicted RBP7.71□□□□□ -1.18
TSPAN3-209ENST00000560715 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 TSPY2A6NKD2 308 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 GADD45BO75293 160 aaPredicted RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 TSPY3P0CV98 308 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 TSPY8P0CW00 308 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 TRIM27P14373 513 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 H2AFXP16104 143 aaPredicted RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 TSPY1Q01534 308 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 BIRC3Q13489 604 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 DNAJC21Q5F1R6 531 aaKnown RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 EEPD1Q7L9B9 569 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 CHCHD4Q8N4Q1 142 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 ZGPATQ8N5A5 531 aaKnown RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 FBXO18Q8NFZ0 1043 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 GOLGA5Q8TBA6 731 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 LRRC4BQ9NT99 713 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 POLR3AO14802 1390 aaPredicted RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 DLC1Q96QB1 1528 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 ADAMTSL3P82987 1691 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 ZPR1O75312 459 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 PMLP29590 882 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 IARSP41252 1262 aaKnown RBP7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 PLA2G4AP47712 749 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 STAT4Q14765 748 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 ELF2Q15723 593 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 PTPRNQ16849 979 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 C6orf118Q5T5N4 469 aa7.7□□□□□ -1.18
TSPAN3-209ENST00000560715 FAM180BQ6P0A1 224 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms