RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 VCPP55072 806 aaKnown RBP12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 C15orf52Q6ZUT6 534 aaKnown RBP12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 GREM2Q9H772 168 aa12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 TBX21Q9UL17 535 aa12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 FAM50BQ9Y247 325 aa12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 TECTAO75443 2155 aa12.54□□□□□ -0.4
KNSTRN-209ENST00000560220 TRIOO75962 3097 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 SNAP23O00161 211 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 PEX10O60683 326 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 PTMSP20962 102 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 AVPR2P30518 371 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 CTSWP56202 376 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 ADHFE1Q8IWW8 467 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 UNC79Q9P2D8 2635 aa12.53□□□□□ -0.4
KNSTRN-209ENST00000560220 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.4
KNSTRN-209ENST00000560220 PHF20L1A8MW92 1017 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 CYBAP13498 195 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 HDLBPQ00341 1268 aaKnown RBP12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 CHRNDQ07001 517 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 TCP10Q12799 353 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 TTLL11Q8NHH1 800 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 TXNRD2Q9NNW7 524 aa12.52□□□□□ -0.41
KNSTRN-209ENST00000560220 SEPT4O43236 478 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 NUBP1P53384 320 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 L1TD1Q5T7N2 865 aaKnown RBP12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 RNF135Q8IUD6 432 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 PPP1R12CQ9BZL4 782 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 PORCNQ9H237 461 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 SALL3Q9BXA9 1300 aa12.51□□□□□ -0.41
KNSTRN-209ENST00000560220 GPR179Q6PRD1 2367 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 MAP1BP46821 2468 aaKnown RBP12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 H7C1W4 665 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 LPXNO60711 386 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 MX1P20591 662 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 Q3C1V9 767 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 FRMD5Q7Z6J6 570 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 PHIPQ8WWQ0 1821 aa12.5□□□□□ -0.41
KNSTRN-209ENST00000560220 CACNA1HO95180 2353 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 H3BQ06 376 aaPredicted RBP12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 TRAK2O60296 914 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 TAF5LO75529 589 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 DMXL1Q9Y485 3027 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
KNSTRN-209ENST00000560220 ZNF292O60281 2723 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 TTC41PQ6P2S7 1318 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 SOBPA7XYQ1 873 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 ERVK-24P63145 666 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 TAP1Q03518 808 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 SKOR2Q2VWA4 1001 aaPredicted RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 RABL6Q3YEC7 729 aaPredicted RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 APOBEC3HQ6NTF7 200 aaKnown RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 RNF180Q86T96 592 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 KIAA2013Q8IYS2 634 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 NEK9Q8TD19 979 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 STARD7Q9NQZ5 370 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 DLL3Q9NYJ7 618 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
KNSTRN-209ENST00000560220 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 CTNND1O60716 968 aaKnown RBP12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 HMGCS2P54868 508 aa12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 HERVK_113P62684 666 aa12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 SPP2Q13103 211 aa12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 GRIK5Q16478 980 aa12.47□□□□□ -0.41
KNSTRN-209ENST00000560220 CLEC17AQ6ZS10 378 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms