RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 MKL1Q969V6 931 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 TTC14Q96N46 770 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 BEGAINQ9BUH8 593 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 GPCPD1Q9NPB8 672 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 KLF18A0A0U1RQI7 1052 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 CA12O43570 354 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 CYP2C8P10632 490 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 SLC1A4P43007 532 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 NT5C2P49902 561 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 MICU3Q86XE3 530 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 KIF2CQ99661 725 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 TM6SF1Q9BZW5 370 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 AGTPBP1Q9UPW5 1226 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 ZSWIM8A7E2V4 1837 aa14.55□□□□□ -0.08
GABPB1-208ENST00000558970 WDR46O15213 610 aaKnown RBP14.54□□□□□ -0.08
GABPB1-208ENST00000558970 ECM2O94769 699 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-208ENST00000558970 NOVP48745 357 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 IRX3P78415 501 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-208ENST00000558970 TOB2Q14106 344 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-208ENST00000558970 TAF1CQ15572 869 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-208ENST00000558970 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 GMCL1P1Q8NEA9 526 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 LPAR1Q92633 364 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 C12orf42Q96LP6 360 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 CPVLQ9H3G5 476 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 FBXO28Q9NVF7 368 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 TSKSQ9UJT2 592 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 BRPF3Q9ULD4 1205 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 SLC12A7Q9Y666 1083 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 WDR19Q8NEZ3 1342 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 A0A0G2JMZ2 1700 aa14.54□□□□□ -0.08
GABPB1-208ENST00000558970 TESPA1A2RU30 521 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-208ENST00000558970 TMEM232C9JQI7 657 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 PEX10O60683 326 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 TRPA1O75762 1119 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 FLOT1O75955 427 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 PDHBP11177 359 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 BMP3P12645 472 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 SLC16A2P36021 539 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 AK2P54819 239 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 STK3Q13188 491 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 TTBK2Q6IQ55 1244 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 ANKRD23Q86SG2 305 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 ANKS1AQ92625 1134 aa14.53□□□□□ -0.08
GABPB1-208ENST00000558970 ASCC2Q9H1I8 757 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-208ENST00000558970 GOLGA8BA8MQT2 603 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L15C9J2P7 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L13C9JLJ4 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L11C9JVI0 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L18D6R9N7 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L22D6RA61 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L17D6RBQ6 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L19D6RCP7 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L20D6RJB6 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 DHX16O60231 1041 aaKnown RBP14.52□□□□□ -0.09
GABPB1-208ENST00000558970 PARP1P09874 1014 aaKnown RBP14.52□□□□□ -0.09
GABPB1-208ENST00000558970 OSBPP22059 807 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 LIFRP42702 1097 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 TM4SF4P48230 202 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 INHBEP58166 350 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 SNAP25P60880 206 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 USP17L24Q0WX57 530 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 OTUD7BQ6GQQ9 843 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 APOA5Q6Q788 366 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 SYNE3Q6ZMZ3 975 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 CATSPERGQ6ZRH7 1159 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 SMCR8Q8TEV9 937 aaPredicted RBP14.52□□□□□ -0.09
GABPB1-208ENST00000558970 DCAF4Q8WV16 495 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 KIFC2Q96AC6 838 aa14.52□□□□□ -0.09
GABPB1-208ENST00000558970 MGAMO43451 1857 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 GOLGA8AA7E2F4 631 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 ZBTB43O43298 467 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 TBC1D8O95759 1140 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 SLC4A3P48751 1232 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
GABPB1-208ENST00000558970 CRHR2Q13324 411 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 CMTR1Q8N1G2 835 aaKnown RBP14.51□□□□□ -0.09
GABPB1-208ENST00000558970 STAG2Q8N3U4 1231 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 PIBF1Q8WXW3 757 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 ATG4CQ96DT6 458 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 GMCL1Q96IK5 515 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 P2RX7Q99572 595 aaKnown RBP14.51□□□□□ -0.09
GABPB1-208ENST00000558970 MTA3Q9BTC8 594 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 PAGR1Q9BTK6 254 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 UBA5Q9GZZ9 404 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 RNF186Q9NXI6 227 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 PNMA3Q9UL41 463 aa14.51□□□□□ -0.09
GABPB1-208ENST00000558970 BAZ2BQ9UIF8 2168 aaKnown RBP14.5□□□□□ -0.09
GABPB1-208ENST00000558970 DTNBO60941 627 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 PPFIA3O75145 1194 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 DDAH1O94760 285 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 STAT2P52630 851 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 CCT2P78371 535 aaKnown RBP14.5□□□□□ -0.09
GABPB1-208ENST00000558970 MLLT1Q03111 559 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-208ENST00000558970 TROAPQ12815 778 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 GRM4Q14833 912 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 RABEP1Q15276 862 aa14.5□□□□□ -0.09
GABPB1-208ENST00000558970 SGMS1Q86VZ5 419 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms