RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 EML3Q32P44 896 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 LDHAL6AQ6ZMR3 332 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 ANKRD23Q86SG2 305 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-208ENST00000558771 LINS1Q8NG48 757 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 DNAAF4Q8WXU2 420 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 TSR2Q969E8 191 aaKnown RBP6.9□□□□□ -1.3
LRRC28-208ENST00000558771 GABRQQ9UN88 632 aa6.9□□□□□ -1.3
LRRC28-208ENST00000558771 MGAMO43451 1857 aa6.9□□□□□ -1.31
LRRC28-208ENST00000558771 ALPK3Q96L96 1907 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 VCANP13611 3396 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 SPATA31C2B4DYI2 1134 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 FCGRTP55899 365 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-208ENST00000558771 MOGSQ13724 837 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 TAF7LQ5H9L4 462 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 EPHA10Q5JZY3 1008 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 LMBR1LQ6UX01 489 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 MIGA2Q7L4E1 593 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 FAM83AQ86UY5 434 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 NANOS1Q8WY41 292 aaKnown RBP6.89□□□□□ -1.31
LRRC28-208ENST00000558771 FAM84BQ96KN1 310 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-208ENST00000558771 CNNM1Q9NRU3 951 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 KCNH4Q9UQ05 1017 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 NOD1Q9Y239 953 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
LRRC28-208ENST00000558771 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 RPAP1Q9BWH6 1393 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 TFRCP02786 760 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 INHAP05111 366 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 CYP2C8P10632 490 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 BCRP11274 1271 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 GDF10P55107 478 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 HDLBPQ00341 1268 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 CHAF1AQ13111 956 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 NCOA4Q13772 614 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 CCDC57Q2TAC2 916 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 TWISTNBQ3B726 338 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 WDR44Q5JSH3 913 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 APOBEC3HQ6NTF7 200 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 TBC1D9Q6ZT07 1266 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 Q7L0L9 218 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 VWA5B2Q8N398 1253 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 DEFB123Q8N688 67 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 GPR161Q8N6U8 529 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 TEKT1Q969V4 418 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 HOOK2Q96ED9 719 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 DEFB118Q96PH6 123 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 UCN2Q96RP3 112 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 ZSCAN10Q96SZ4 725 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 PARK7Q99497 189 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 GDF15Q99988 308 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 ZNF341Q9BYN7 854 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 PUS3Q9BZE2 481 aaKnown RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 TMOD2Q9NZR1 351 aa6.88□□□□□ -1.31
LRRC28-208ENST00000558771 IQSEC3Q9UPP2 1182 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-208ENST00000558771 ADCY3O60266 1144 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 ELNP15502 786 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 BMP8BP34820 402 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 FLT3LGP49771 235 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 BEND3Q5T5X7 828 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 FKBP1CQ5VVH2 108 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 GPAT2Q6NUI2 795 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 TAS1R3Q7RTX0 852 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 FBXO33Q7Z6M2 555 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 DIS3LQ8TF46 1054 aaKnown RBP6.87□□□□□ -1.31
LRRC28-208ENST00000558771 GLMNQ92990 594 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 PAWRQ96IZ0 340 aaKnown RBP6.87□□□□□ -1.31
LRRC28-208ENST00000558771 ZDHHC15Q96MV8 337 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-208ENST00000558771 ZNF112Q9UJU3 913 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 STXBP5LQ9Y2K9 1186 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 EYSQ5T1H1 3165 aa6.87□□□□□ -1.31
LRRC28-208ENST00000558771 TMEM229AB2RXF0 380 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 F6X3S4 739 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 ATP9BO43861 1147 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 FRAT2O75474 233 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 CAPN2P17655 700 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 INSM1Q01101 510 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 DDX10Q13206 875 aaKnown RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 LRIT3Q3SXY7 679 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 NOL9Q5SY16 702 aaKnown RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 TMEM214Q6NUQ4 689 aaKnown RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 SV2AQ7L0J3 742 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 NECAB2Q7Z6G3 386 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 VPS37DQ86XT2 251 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 C7orf61Q8IZ16 206 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 TBC1D22AQ8WUA7 517 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 FAM151AQ8WW52 585 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 MRIQ9BWK5 157 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 PAK6Q9NQU5 681 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 MTMR10Q9NXD2 777 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 ZMYND8Q9ULU4 1186 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 DYRK1BQ9Y463 629 aa6.86□□□□□ -1.31
LRRC28-208ENST00000558771 SPTBN5Q9NRC6 3674 aaKnown RBP6.86□□□□□ -1.31
LRRC28-208ENST00000558771 DOCK3Q8IZD9 2030 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms