RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 NDUFB10O96000 172 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 PDHBP11177 359 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 PDIA3P30101 505 aaKnown RBP20.96■□□□□ 0.95
RNF213-206ENST00000558488 KIF5BP33176 963 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 MTMR2Q13614 643 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 GRM4Q14833 912 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 ASPRV1Q53RT3 343 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 GPATCH4Q5T3I0 446 aaKnown RBP20.96■□□□□ 0.95
RNF213-206ENST00000558488 HSCBQ8IWL3 235 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 RBM28Q9NW13 759 aaKnown RBP20.96■□□□□ 0.95
RNF213-206ENST00000558488 HTTP42858 3142 aa20.96■□□□□ 0.95
RNF213-206ENST00000558488 A0A0G2JLL6 359 aaPredicted RBP20.95■□□□□ 0.94
RNF213-206ENST00000558488 CCDC196A0A1B0GTZ2 297 aa20.95■□□□□ 0.94
RNF213-206ENST00000558488 K7ELQ4 463 aaPredicted RBP20.95■□□□□ 0.94
RNF213-206ENST00000558488 IRF6O14896 467 aa20.95■□□□□ 0.94
RNF213-206ENST00000558488 PFKFB2O60825 505 aa20.95■□□□□ 0.94
RNF213-206ENST00000558488 METAP2P50579 478 aaKnown RBP eCLIP20.95■□□□□ 0.94
RNF213-206ENST00000558488 SLFN13Q68D06 897 aa20.95■□□□□ 0.94
RNF213-206ENST00000558488 PRRT2Q7Z6L0 340 aaPredicted RBP20.95■□□□□ 0.94
RNF213-206ENST00000558488 MICU3Q86XE3 530 aa20.95■□□□□ 0.94
RNF213-206ENST00000558488 CTCFLQ8NI51 663 aaPredicted RBP20.95■□□□□ 0.94
RNF213-206ENST00000558488 HPS5Q9UPZ3 1129 aa20.95■□□□□ 0.94
RNF213-206ENST00000558488 TRIM75PA6NK02 468 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 GOLGA8AA7E2F4 631 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 WDR46O15213 610 aaKnown RBP20.94■□□□□ 0.94
RNF213-206ENST00000558488 SLC10A3P09131 477 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 ANP32AP39687 249 aaKnown RBP20.94■□□□□ 0.94
RNF213-206ENST00000558488 GNAQP50148 359 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 SNAPC2Q13487 334 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 ME3Q16798 604 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 SPRYD7Q5W111 196 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 RASAL3Q86YV0 1011 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 FANCBQ8NB91 859 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 PROCA1Q8NCQ7 364 aaPredicted RBP20.94■□□□□ 0.94
RNF213-206ENST00000558488 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 SLKQ9H2G2 1235 aaPredicted RBP20.94■□□□□ 0.94
RNF213-206ENST00000558488 TMOD4Q9NZQ9 345 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 LOC285556D6RIA3 1793 aa20.94■□□□□ 0.94
RNF213-206ENST00000558488 CENPFP49454 3210 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 DHX16O60231 1041 aaKnown RBP20.93■□□□□ 0.94
RNF213-206ENST00000558488 GJA5P36382 358 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 SLC1A4P43007 532 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 ZNF543Q08ER8 600 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 BECN1Q14457 450 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 RTN1Q16799 776 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 GTF3C6Q969F1 213 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 CCDC102AQ96A19 550 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 TMX3Q96JJ7 454 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 EMILIN3Q9NT22 766 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 SAGE1Q9NXZ1 904 aa20.93■□□□□ 0.94
RNF213-206ENST00000558488 PALM3A6NDB9 673 aaPredicted RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 PARP1P09874 1014 aaKnown RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 BMP3P12645 472 aa20.92■□□□□ 0.94
RNF213-206ENST00000558488 ZNF157P51786 506 aaPredicted RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 GTF2A2P52657 109 aa20.92■□□□□ 0.94
RNF213-206ENST00000558488 NOL8Q76FK4 1167 aaKnown RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 FASTKD5Q7L8L6 764 aaKnown RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 LZTS2Q9BRK4 669 aa20.92■□□□□ 0.94
RNF213-206ENST00000558488 MYL10Q9BUA6 226 aa20.92■□□□□ 0.94
RNF213-206ENST00000558488 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 RBM19Q9Y4C8 960 aaKnown RBP20.92■□□□□ 0.94
RNF213-206ENST00000558488 PTPRFP10586 1907 aa20.92■□□□□ 0.94
RNF213-206ENST00000558488 CEP290O15078 2479 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 PLA2G6O60733 806 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 LARGE1O95461 756 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 VCAM1P19320 739 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 SMARCA1P28370 1054 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 HMGCS2P54868 508 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 ZYXQ15942 572 aaKnown RBP20.91■□□□□ 0.94
RNF213-206ENST00000558488 CPLX2Q6PUV4 134 aaKnown RBP20.91■□□□□ 0.94
RNF213-206ENST00000558488 LARP6Q9BRS8 491 aaKnown RBP20.91■□□□□ 0.94
RNF213-206ENST00000558488 MAD2L2Q9UI95 211 aa20.91■□□□□ 0.94
RNF213-206ENST00000558488 CETPP11597 493 aa20.9■□□□□ 0.94
RNF213-206ENST00000558488 SCRN1Q12765 414 aa20.9■□□□□ 0.94
RNF213-206ENST00000558488 CUL4AQ13619 759 aa20.9■□□□□ 0.94
RNF213-206ENST00000558488 CCDC96Q2M329 555 aa20.9■□□□□ 0.94
RNF213-206ENST00000558488 CTU1Q7Z7A3 348 aaKnown RBP20.9■□□□□ 0.94
RNF213-206ENST00000558488 FAM217BQ9NTX9 383 aaPredicted RBP20.9■□□□□ 0.94
RNF213-206ENST00000558488 KIAA0100Q14667 2235 aaKnown RBP20.89■□□□□ 0.94
RNF213-206ENST00000558488 MANSC4A6NHS7 340 aaPredicted RBP20.89■□□□□ 0.93
RNF213-206ENST00000558488 CDKL5O76039 1030 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 RXRAP19793 462 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 KIAA1755Q5JYT7 1200 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 BTNL9Q6UXG8 535 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 TMTC3Q6ZXV5 915 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 FAM160B2Q86V87 743 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 MS4A4AQ96JQ5 239 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 LLPHQ9BRT6 129 aaKnown RBP20.89■□□□□ 0.93
RNF213-206ENST00000558488 AGTPBP1Q9UPW5 1226 aa20.89■□□□□ 0.93
RNF213-206ENST00000558488 BRCA2P51587 3418 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 MYPNQ86TC9 1320 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 TESPA1A2RU30 521 aaPredicted RBP20.88■□□□□ 0.93
RNF213-206ENST00000558488 RAD21O60216 631 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 STK3Q13188 491 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 PABPC4Q13310 644 aaKnown RBP eCLIP20.88■□□□□ 0.93
RNF213-206ENST00000558488 SPICE1Q8N0Z3 855 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 SPZ1Q9BXG8 430 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 FEM1BQ9UK73 627 aa20.88■□□□□ 0.93
RNF213-206ENST00000558488 SLC45A1Q9Y2W3 748 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms