RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 ACER1Q8TDN7 264 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 C12orf42Q96LP6 360 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 ORC3Q9UBD5 711 aaPredicted RBP17.27■□□□□ 0.36
VPS18-202ENST00000558474 JAK2O60674 1132 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 BMP3P12645 472 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 BACE1P56817 501 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 PRKG1Q13976 671 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 BTNL9Q6UXG8 535 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
VPS18-202ENST00000558474 FEZ1Q99689 392 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 GBA2Q9HCG7 927 aaPredicted RBP17.26■□□□□ 0.35
VPS18-202ENST00000558474 AFG3L2Q9Y4W6 797 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
VPS18-202ENST00000558474 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 SPDYE5A6NIY4 337 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 TRAF5O00463 557 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 KIF3CO14782 793 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 WDR46O15213 610 aaKnown RBP17.25■□□□□ 0.35
VPS18-202ENST00000558474 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 FDPSP14324 419 aaKnown RBP17.25■□□□□ 0.35
VPS18-202ENST00000558474 SH3D19Q5HYK7 790 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 SLC26A6Q9BXS9 759 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 FZD1Q9UP38 647 aa17.25■□□□□ 0.35
VPS18-202ENST00000558474 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 CXCL11O14625 94 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 SPP2Q13103 211 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 CCDC96Q2M329 555 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
VPS18-202ENST00000558474 FAM160B2Q86V87 743 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
VPS18-202ENST00000558474 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 PHKBQ93100 1093 aa17.24■□□□□ 0.35
VPS18-202ENST00000558474 PTPRFP10586 1907 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 CELF2O95319 508 aaKnown RBP17.23■□□□□ 0.35
VPS18-202ENST00000558474 XBP1P17861 261 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 SYT1P21579 422 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 PPIL2Q13356 520 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
VPS18-202ENST00000558474 FEM1BQ9UK73 627 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
VPS18-202ENST00000558474 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
VPS18-202ENST00000558474 PASKQ96RG2 1323 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
VPS18-202ENST00000558474 STX6O43752 255 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 TOMM70O94826 608 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 STAT2P52630 851 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 MTMR2Q13614 643 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
VPS18-202ENST00000558474 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 RRP36Q96EU6 259 aaKnown RBP17.22■□□□□ 0.35
VPS18-202ENST00000558474 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 SH3GLB2Q9NR46 395 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 KCNH4Q9UQ05 1017 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 V9GY48 417 aaPredicted RBP17.22■□□□□ 0.35
VPS18-202ENST00000558474 LOC285556D6RIA3 1793 aa17.22■□□□□ 0.35
VPS18-202ENST00000558474 UBE2Q2LH0YL09 131 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 CYTH3O43739 400 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 RAD21O60216 631 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 FDX1P10109 184 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 TRAF1Q13077 416 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 KCTD1Q719H9 257 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
VPS18-202ENST00000558474 CMTR1Q8N1G2 835 aaKnown RBP17.21■□□□□ 0.35
VPS18-202ENST00000558474 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 PROCA1Q8NCQ7 364 aaPredicted RBP17.21■□□□□ 0.35
VPS18-202ENST00000558474 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 ALG1Q9BT22 464 aa17.21■□□□□ 0.35
VPS18-202ENST00000558474 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
VPS18-202ENST00000558474 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 BRD1O95696 1058 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 SCG2P13521 617 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 FSTL1Q12841 308 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 TRIM29Q14134 588 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 PKN1Q16512 942 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 CST9Q5W186 159 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 MOB2Q70IA6 237 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
VPS18-202ENST00000558474 A0A0G2JLL6 359 aaPredicted RBP17.19■□□□□ 0.34
VPS18-202ENST00000558474 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 H3BQV1 296 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 VCAM1P19320 739 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 ZYXQ15942 572 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms