RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 AS3MTQ9HBK9 375 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 TMOD4Q9NZQ9 345 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 RAI14Q9P0K7 980 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 HMG20BQ9P0W2 317 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 RBPJLQ9UBG7 517 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 HERC5Q9UII4 1024 aaKnown RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 TTC28Q96AY4 2481 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 SIPA1L1O43166 1804 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 ANP32CO43423 234 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 GDF11O95390 407 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 LDHCP07864 332 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 ASNSP08243 561 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 RGS2P41220 211 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 ERVK-9P63128 1117 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 ERVK-24P63145 666 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 GSTO1P78417 241 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 KCNA1Q09470 495 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 Q3C1V9 767 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 ALDH1L2Q3SY69 923 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 POM121Q96HA1 1249 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 MEIS3Q99687 375 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 PAGR1Q9BTK6 254 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 SMC4Q9NTJ3 1288 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 AKAP2Q9Y2D5 859 aa7.2□□□□□ -1.26
VPS33B-207ENST00000557470 MAST2Q6P0Q8 1798 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 C19orf81C9J6K1 198 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L10C9JJH3 530 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 ARID4AP29374 1257 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 MCAMP43121 646 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 PUS10Q3MIT2 529 aaKnown RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 PLEKHH3Q7Z736 793 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 CCAR1Q8IX12 1150 aaKnown RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 NEUROD6Q96NK8 337 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 LBHD1Q9BQE6 289 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 SENP6Q9GZR1 1112 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 DHX36Q9H2U1 1008 aaKnown RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 AATFQ9NY61 560 aaKnown RBP eCLIP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 FLRT1Q9NZU1 646 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 PI4KBQ9UBF8 816 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 ZBTB21Q9ULJ3 1066 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 NOB1Q9ULX3 412 aaKnown RBP7.19□□□□□ -1.26
VPS33B-207ENST00000557470 NDUFB9Q9Y6M9 179 aa7.19□□□□□ -1.26
VPS33B-207ENST00000557470 FRMPD3Q5JV73 1810 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 SRGAP3O43295 1099 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 CNMDO75829 334 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 SLFN5Q08AF3 891 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 MAP2K5Q13163 448 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 GORABQ5T7V8 394 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 ZNF697Q5TEC3 545 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 ADGRA1Q86SQ6 560 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 METTL16Q86W50 562 aaKnown RBP7.18□□□□□ -1.26
VPS33B-207ENST00000557470 MAPKAPK5Q8IW41 473 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 GTF3C2Q8WUA4 911 aaPredicted RBP7.18□□□□□ -1.26
VPS33B-207ENST00000557470 TGFBRAP1Q8WUH2 860 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 CDX2Q99626 313 aaPredicted RBP7.18□□□□□ -1.26
VPS33B-207ENST00000557470 TRIM34Q9BYJ4 488 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 CWC22Q9HCG8 908 aaKnown RBP7.18□□□□□ -1.26
VPS33B-207ENST00000557470 LRP2BPQ9P2M1 347 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 PALD1Q9ULE6 856 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 HDAC5Q9UQL6 1122 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 FLT1P17948 1338 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 CDH23Q9H251 3354 aa7.18□□□□□ -1.26
VPS33B-207ENST00000557470 SLC15A5A6NIM6 579 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 DDX11L8A8MPP1 907 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 BAG3O95817 575 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 CNGA1P29973 690 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 RTP1P59025 263 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 MTX1Q13505 466 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 ZYXQ15942 572 aaKnown RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 WDR78Q5VTH9 848 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 MFSD14CQ5VZR4 134 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 NAA16Q6N069 864 aaPredicted RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 USP17L2Q6R6M4 530 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 FAM177A1Q8N128 213 aaPredicted RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 CRACR2BQ8N4Y2 399 aaPredicted RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 RDH13Q8NBN7 331 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 TRPV1Q8NER1 839 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 MAFAQ8NHW3 353 aaPredicted RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 LPAR1Q92633 364 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 EDC3Q96F86 508 aaKnown RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 FEZ1Q99689 392 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 NOL10Q9BSC4 688 aaKnown RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 API5Q9BZZ5 524 aaKnown RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 GINM1Q9NU53 330 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 DDX20Q9UHI6 824 aaKnown RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 SAP30BPQ9UHR5 308 aaKnown RBP7.17□□□□□ -1.26
VPS33B-207ENST00000557470 RABGAP1Q9Y3P9 1069 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 LTBP2Q14767 1821 aa7.17□□□□□ -1.26
VPS33B-207ENST00000557470 RNF223E7ERA6 249 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 DNM1LO00429 736 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 MSCO60682 206 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 BRD1O95696 1058 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 GH2P01242 217 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 IGHA2P01877 340 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 HOXC6P09630 235 aa7.16□□□□□ -1.26
VPS33B-207ENST00000557470 UQCRFS1P1P0C7P4 283 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms