RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TRIM49BA6NDI0 452 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
SRP54-213ENST00000556994 E2F4Q16254 413 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 TCP11X2Q5H9J9 407 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 IQUBQ8NA54 791 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 PSD3Q9NYI0 1048 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
SRP54-213ENST00000556994 NMT2O60551 498 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 SRGAP2O75044 1071 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
SRP54-213ENST00000556994 PAK1Q13153 545 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 REXO2Q9Y3B8 237 aaKnown RBP12.85□□□□□ -0.35
SRP54-213ENST00000556994 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 MAGEB6P1A0A0J9YX57 407 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 MYO1CO00159 1063 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
SRP54-213ENST00000556994 FECHP22830 423 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 PRCPP42785 496 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 WHAMMP3Q1A5X7 153 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 PDXDC2PQ6P474 469 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 TNFRSF25Q93038 417 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 RWDD2AQ9UIY3 292 aa12.85□□□□□ -0.35
SRP54-213ENST00000556994 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
SRP54-213ENST00000556994 TTC26A0AVF1 554 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 NDUFA10O95299 355 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 RCAN1P53805 252 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 AMPD2Q01433 879 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 TROAPQ12815 778 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 TUBB2AQ13885 445 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 SRBD1Q8N5C6 995 aaKnown RBP12.84□□□□□ -0.35
SRP54-213ENST00000556994 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 TUBB2BQ9BVA1 445 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
SRP54-213ENST00000556994 DOCK2Q92608 1830 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 ZMYND10O75800 440 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 GYG1P46976 350 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 PMS1P54277 932 aaKnown RBP12.84□□□□□ -0.35
SRP54-213ENST00000556994 NLRP5P59047 1200 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 LEKR1Q6ZMV7 388 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 PLIN2Q99541 437 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 HINFPQ9BQA5 517 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 MTA3Q9BTC8 594 aa12.84□□□□□ -0.35
SRP54-213ENST00000556994 NUP98P52948 1817 aa12.83□□□□□ -0.35
SRP54-213ENST00000556994 SLIT2O94813 1529 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 ATP1A1P05023 1023 aaKnown RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 CHRNDQ07001 517 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 HSP90B2PQ58FF3 399 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 A0A0G2JS52 829 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 BMP15O95972 392 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 BCORQ6W2J9 1755 aa12.83□□□□□ -0.36
SRP54-213ENST00000556994 BAZ2AQ9UIF9 1905 aaKnown RBP12.83□□□□□ -0.36
SRP54-213ENST00000556994 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
SRP54-213ENST00000556994 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
SRP54-213ENST00000556994 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 SKIDA1Q1XH10 827 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 TMTC3Q6ZXV5 915 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 SRLQ86TD4 932 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 RASGRP4Q8TDF6 673 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 RIOK1Q9BRS2 568 aaKnown RBP12.82□□□□□ -0.36
SRP54-213ENST00000556994 MYO1AQ9UBC5 1043 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 ANAPC4Q9UJX5 808 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 ANKRD65E5RJM6 399 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
SRP54-213ENST00000556994 HERVK_113P62684 666 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 SPAG1Q07617 926 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 CCDC122Q5T0U0 273 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 TRAPPC11Q7Z392 1133 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 CCDC148Q8NFR7 591 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 GBP3Q9H0R5 595 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 FAM204AQ9H8W3 233 aa12.82□□□□□ -0.36
SRP54-213ENST00000556994 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
SRP54-213ENST00000556994 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
SRP54-213ENST00000556994 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 USP17L21D6R901 530 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 TUBB4BP68371 445 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms