RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-206	ENST00000556375	TOMM22	Q9NS69	142 aa		13.65	□□□□□ -0.22
SLIRP-206	ENST00000556375	GJD2	Q9UKL4	321 aa		13.65	□□□□□ -0.22
SLIRP-206	ENST00000556375	TNRC18	O15417	2968 aa	Predicted RBP	13.65	□□□□□ -0.22
SLIRP-206	ENST00000556375	NT5C2	P49902	561 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	AKNAD1	Q5T1N1	836 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	PLEKHH3	Q7Z736	793 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	NUP88	Q99567	741 aa	Predicted RBP	13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	SPATC1L	Q9H0A9	340 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	CWC22	Q9HCG8	908 aa	Known RBP	13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	FBXO28	Q9NVF7	368 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	CTNNA3	Q9UI47	895 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	PPP1R9A	Q9ULJ8	1098 aa		13.64	□□□□□ -0.23
SLIRP-206	ENST00000556375	ZNF213	O14771	459 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	ELN	P15502	786 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	NOV	P48745	357 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	UBXN2A	P68543	259 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	RRP12	Q5JTH9	1297 aa	Known RBP	13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	MFSD6	Q6ZSS7	791 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	SHCBP1	Q8NEM2	672 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	CCDC136	Q96JN2	1154 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	NUDT12	Q9BQG2	462 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	SLF1	Q9BQI6	1058 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	TMEM106C	Q9BVX2	250 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	IL17RB	Q9NRM6	502 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	ADAMTS5	Q9UNA0	930 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	STX8	Q9UNK0	236 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	NEDD4	P46934	1319 aa		13.63	□□□□□ -0.23
SLIRP-206	ENST00000556375	POTEF	A5A3E0	1075 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	NMT2	O60551	498 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	HMGCR	P04035	888 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	INHA	P05111	366 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	XRCC5	P13010	732 aa	Known RBP	13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	MLLT1	Q03111	559 aa	Predicted RBP	13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	IMMT	Q16891	758 aa	Known RBP	13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	MORN1	Q5T089	497 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	WDR78	Q5VTH9	848 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	SLFN13	Q68D06	897 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	USP6NL	Q92738	828 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	GMCL1	Q96IK5	515 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	APBA2	Q99767	749 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	TCP11L1	Q9NUJ3	509 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	BIN2	Q9UBW5	565 aa	Predicted RBP	13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	IVNS1ABP	Q9Y6Y0	642 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	PDE4DIP	Q5VU43	2346 aa		13.62	□□□□□ -0.23
SLIRP-206	ENST00000556375	SLC15A5	A6NIM6	579 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	VWA5A	O00534	786 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	SGSM2	O43147	1006 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	MYC	P01106	439 aa	Predicted RBP	13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	CENPB	P07199	599 aa	Predicted RBP	13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	BMP3	P12645	472 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	CCL5	P13501	91 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	PTPRE	P23469	700 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	RGS2	P41220	211 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	GRB14	Q14449	540 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	TMEM132B	Q14DG7	1078 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	MTFR1	Q15390	333 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	BMP2KL	Q5H9B9	411 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	REPS2	Q8NFH8	660 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	ESR2	Q92731	530 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	FEM1B	Q9UK73	627 aa		13.61	□□□□□ -0.23
SLIRP-206	ENST00000556375	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	SLC25A27	O95847	323 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	ZKSCAN1	P17029	563 aa	Predicted RBP	13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	ERCC3	P19447	782 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	CYP2B6	P20813	491 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	COPB2	P35606	906 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	SLC1A4	P43007	532 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	MAP2K5	Q13163	448 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	PLS1	Q14651	629 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	SKAP1	Q86WV1	359 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	TRMT44	Q8IYL2	757 aa	Known RBP	13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	PRPF38A	Q8NAV1	312 aa	Known RBP	13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	TRIB2	Q92519	343 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	MROH8	Q9H579	483 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	PLXNA1	Q9UIW2	1896 aa		13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	ZNF214	Q9UL59	606 aa	Predicted RBP	13.6	□□□□□ -0.23
SLIRP-206	ENST00000556375	HOXC6	P09630	235 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	TOP1	P11387	765 aa	Known RBP	13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	STAT2	P52630	851 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	RIOX2	Q8IUF8	465 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	RNF208	Q9H0X6	261 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	UNC93B1	Q9H1C4	597 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	CNNM2	Q9H8M5	875 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375		U3KPZ7	1027 aa	Predicted RBP	13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	FRMPD3	Q5JV73	1810 aa		13.59	□□□□□ -0.23
SLIRP-206	ENST00000556375	MKI67	P46013	3256 aa	Known RBP	13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	TMEM232	C9JQI7	657 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	ATP2A1	O14983	1001 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	STRN	O43815	780 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	PLA2G6	O60733	806 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	KDM4A	O75164	1064 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	GJB1	P08034	283 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	EN2	P19622	333 aa	Predicted RBP	13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	MCC	P23508	829 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	STAT3	P40763	770 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	PTH1R	Q03431	593 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	RCSD1	Q6JBY9	416 aa		13.58	□□□□□ -0.24
SLIRP-206	ENST00000556375	FAM160B2	Q86V87	743 aa		13.58	□□□□□ -0.24

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